STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CHU_2225CHU large protein; Gliding motility-related protein protein; possible adhesin AidA-related protein. (2402 aa)    
Predicted Functional Partners:
CHU_2224
Hypothetical protein.
       0.773
arnT-2
4-amino-4-deoxy-L-arabinose transferase (lipid A modification).
  
     0.709
CHU_3259
CHU large protein; uncharacterized.
  
 
   0.661
CHU_0918
Hypothetical protein.
  
    0.654
CHU_1671
Conserved hypothetical protein.
  
     0.640
CHU_0134
Possible thiol-disulfide isomerase.
  
    0.592
CHU_1690
Hypothetical protein.
  
     0.587
CHU_2709
PorT-related protein.
  
   
 0.585
CHU_2285
Conserved hypothetical protein.
  
 
   0.583
CHU_3275
Hypothetical protein.
  
     0.581
Your Current Organism:
Cytophaga hutchinsonii
NCBI taxonomy Id: 269798
Other names: C. hutchinsonii ATCC 33406, Cytophaga hutchinsonii ATCC 33406, Cytophaga hutchinsonii str. ATCC 33406, Cytophaga hutchinsonii strain ATCC 33406
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.