Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
CHU_0258 | CHU_2391 | CHU_0258 | CHU_2391 | Hypothetical protein. | Conserved hypothetical protein; possible dithiol-disulfide isomerase. | 0.409 |
CHU_2391 | CHU_0258 | CHU_2391 | CHU_0258 | Conserved hypothetical protein; possible dithiol-disulfide isomerase. | Hypothetical protein. | 0.409 |
CHU_2391 | CHU_2392 | CHU_2391 | CHU_2392 | Conserved hypothetical protein; possible dithiol-disulfide isomerase. | Transcriptional regulator. | 0.674 |
CHU_2391 | CHU_3575 | CHU_2391 | CHU_3575 | Conserved hypothetical protein; possible dithiol-disulfide isomerase. | Hemoglobin-like protein. | 0.427 |
CHU_2391 | CHU_3594 | CHU_2391 | CHU_3594 | Conserved hypothetical protein; possible dithiol-disulfide isomerase. | Conserved hypothetical protein; possible arsenate reductase; Belongs to the ArsC family. | 0.754 |
CHU_2391 | arsC | CHU_2391 | CHU_1588 | Conserved hypothetical protein; possible dithiol-disulfide isomerase. | Arsenate reductase (glutaredoxin); Belongs to the ArsC family. | 0.754 |
CHU_2391 | spoT | CHU_2391 | CHU_2390 | Conserved hypothetical protein; possible dithiol-disulfide isomerase. | Guanosine polyphosphate pyrophosphohydrolase. | 0.473 |
CHU_2392 | CHU_2391 | CHU_2392 | CHU_2391 | Transcriptional regulator. | Conserved hypothetical protein; possible dithiol-disulfide isomerase. | 0.674 |
CHU_3575 | CHU_2391 | CHU_3575 | CHU_2391 | Hemoglobin-like protein. | Conserved hypothetical protein; possible dithiol-disulfide isomerase. | 0.427 |
CHU_3594 | CHU_2391 | CHU_3594 | CHU_2391 | Conserved hypothetical protein; possible arsenate reductase; Belongs to the ArsC family. | Conserved hypothetical protein; possible dithiol-disulfide isomerase. | 0.754 |
arsC | CHU_2391 | CHU_1588 | CHU_2391 | Arsenate reductase (glutaredoxin); Belongs to the ArsC family. | Conserved hypothetical protein; possible dithiol-disulfide isomerase. | 0.754 |
spoT | CHU_2391 | CHU_2390 | CHU_2391 | Guanosine polyphosphate pyrophosphohydrolase. | Conserved hypothetical protein; possible dithiol-disulfide isomerase. | 0.473 |