Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
CHU_2599 | CHU_2600 | CHU_2599 | CHU_2600 | Hypothetical protein. | Proteasome-type protease. | 0.431 |
CHU_2600 | CHU_2599 | CHU_2600 | CHU_2599 | Proteasome-type protease. | Hypothetical protein. | 0.431 |
CHU_2600 | CHU_2601 | CHU_2600 | CHU_2601 | Proteasome-type protease. | Transglutaminase-like enzymes, putative cysteine protease. | 0.888 |
CHU_2600 | CHU_3461 | CHU_2600 | CHU_3461 | Proteasome-type protease. | Conserved hypothetical protein. | 0.721 |
CHU_2600 | CHU_3462 | CHU_2600 | CHU_3462 | Proteasome-type protease. | Conserved hypothetical protein. | 0.706 |
CHU_2600 | treC | CHU_2600 | CHU_2602 | Proteasome-type protease. | Maltooligosyl trehalose synthase. | 0.601 |
CHU_2601 | CHU_2600 | CHU_2601 | CHU_2600 | Transglutaminase-like enzymes, putative cysteine protease. | Proteasome-type protease. | 0.888 |
CHU_2601 | CHU_3461 | CHU_2601 | CHU_3461 | Transglutaminase-like enzymes, putative cysteine protease. | Conserved hypothetical protein. | 0.817 |
CHU_2601 | CHU_3462 | CHU_2601 | CHU_3462 | Transglutaminase-like enzymes, putative cysteine protease. | Conserved hypothetical protein. | 0.825 |
CHU_2601 | treC | CHU_2601 | CHU_2602 | Transglutaminase-like enzymes, putative cysteine protease. | Maltooligosyl trehalose synthase. | 0.689 |
CHU_3461 | CHU_2600 | CHU_3461 | CHU_2600 | Conserved hypothetical protein. | Proteasome-type protease. | 0.721 |
CHU_3461 | CHU_2601 | CHU_3461 | CHU_2601 | Conserved hypothetical protein. | Transglutaminase-like enzymes, putative cysteine protease. | 0.817 |
CHU_3461 | CHU_3462 | CHU_3461 | CHU_3462 | Conserved hypothetical protein. | Conserved hypothetical protein. | 0.994 |
CHU_3462 | CHU_2600 | CHU_3462 | CHU_2600 | Conserved hypothetical protein. | Proteasome-type protease. | 0.706 |
CHU_3462 | CHU_2601 | CHU_3462 | CHU_2601 | Conserved hypothetical protein. | Transglutaminase-like enzymes, putative cysteine protease. | 0.825 |
CHU_3462 | CHU_3461 | CHU_3462 | CHU_3461 | Conserved hypothetical protein. | Conserved hypothetical protein. | 0.994 |
treC | CHU_2600 | CHU_2602 | CHU_2600 | Maltooligosyl trehalose synthase. | Proteasome-type protease. | 0.601 |
treC | CHU_2601 | CHU_2602 | CHU_2601 | Maltooligosyl trehalose synthase. | Transglutaminase-like enzymes, putative cysteine protease. | 0.689 |