STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CHU_2699Gliding motility-related protein; possible outer membrane protein. (214 aa)    
Predicted Functional Partners:
ftsK
Cell division protein.
 
  
 0.795
CHU_2698
Orotidine 5' phosphate decarboxylase.
       0.777
gldL
Protein involved in gliding motility GldL.
  
     0.764
yiaD-3
Possible outer membrane protein.
 
 
 0.738
CHU_2610
Protein involved in gliding motility GldN.
  
     0.730
CHU_0174
Gliding related protein; possible gldN and/or gldO.
  
     0.724
CHU_1956
Conserved hypothetical protein.
  
    0.723
rsaD-4
ABC-type lipoprotein releasing system, ATP-binding protein; Part of the ABC transporter complex LolCDE involved in the translocation of mature outer membrane-directed lipoproteins, from the inner membrane to the periplasmic chaperone, LolA. Responsible for the formation of the LolA-lipoprotein complex in an ATP-dependent manner.
   
 
 0.723
CHU_2644
ABC transporter, ATP-binding protein.
   
 
 0.723
gldM
Gliding motility-related protein.
  
     0.721
Your Current Organism:
Cytophaga hutchinsonii
NCBI taxonomy Id: 269798
Other names: C. hutchinsonii ATCC 33406, Cytophaga hutchinsonii ATCC 33406, Cytophaga hutchinsonii str. ATCC 33406, Cytophaga hutchinsonii strain ATCC 33406
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.