STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CHU_2765Pyridoxal-phosphate-dependent aminotransferase; Belongs to the DegT/DnrJ/EryC1 family. (387 aa)    
Predicted Functional Partners:
CHU_2766
UDP-N-acetylglucosamine 4,6-dehydratase; UDP-4-dehydro-6-deoxy-2-acetamido-D-glucose 4-reductase.
 
 0.994
CHU_2760
Polysaccharide biosynthesis protein; possible glycosyltransferase.
 
  
 0.892
neuB
N-acetylneuraminate synthase.
 
  
 0.878
kdsB
CMP-N-acetylneuraminic acid synthetase.
 
  
 0.838
CHU_1927
Bacterial sugar transferase.
  
  
 0.837
CHU_2759
Acetyltransferase, GNAT family.
 
  
 0.793
CHU_2762
Conserved hypothetical protein; possible methyltransferase.
 
     0.793
CHU_2764
Hypothetical protein.
       0.773
CHU_2763
Conserved hypothetical protein; possible dTDP-6-deoxy-L-hexose 3-O-methyltransferase.
       0.718
rfbB-2
dTDP-glucose 4,6-dehydratase; Belongs to the NAD(P)-dependent epimerase/dehydratase family. dTDP-glucose dehydratase subfamily.
 
  
 0.685
Your Current Organism:
Cytophaga hutchinsonii
NCBI taxonomy Id: 269798
Other names: C. hutchinsonii ATCC 33406, Cytophaga hutchinsonii ATCC 33406, Cytophaga hutchinsonii str. ATCC 33406, Cytophaga hutchinsonii strain ATCC 33406
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.