STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
rcsC-4Sensor for ctr capsule biosynthesis, probable histidine kinase acting on RcsB. (124 aa)    
Predicted Functional Partners:
arcB-11
Multi-sensor hybrid histidine kinase.
 
 
0.988
CHU_1237
Chemotaxis response regulator (methyltransferase).
 
 
 0.963
CHU_1899
PAS/PAC sensor signal transduction histidine kinase.
 
 0.948
CHU_2895
PAS/PAC sensor hybrid histidine kinase.
 
 
0.941
arcB-12
PAS/PAC sensor signal transduction histidine kinase.
 
 0.940
atoS-3
Sensor histidine kinase.
 
 0.928
barA-6
PAS/PAC sensor signal transduction histidine kinase.
 
 0.925
atoS-7
Two-component sensor histidine kinase.
 
 
 0.904
arcB
Aerobic respiration sensor-response protein; histidine protein kinase/phosphatase, sensor for arcA.
 
 
 0.866
atoS
Sensor histidine kinase.
 
 
 0.862
Your Current Organism:
Cytophaga hutchinsonii
NCBI taxonomy Id: 269798
Other names: C. hutchinsonii ATCC 33406, Cytophaga hutchinsonii ATCC 33406, Cytophaga hutchinsonii str. ATCC 33406, Cytophaga hutchinsonii strain ATCC 33406
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