STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CHU_3441CHU large protein; b-glycosidase related, glycoside hydrolase family 8 protein. (2807 aa)    
Predicted Functional Partners:
CHU_1525
CHU large protein; possible Rhs family-related protein and SAP-related protein.
  
     0.775
CHU_3119
CHU large protein; possible phytase.
  
     0.774
CHU_1051
Similar to CHU large proteins.
  
     0.773
CHU_2670
Conserved hypothetical protein; Possible outer membrane related protein.
  
     0.773
CHU_1253
Conserved hypothetical protein.
  
     0.772
CHU_1336
CHU large protein; endoglucanase-related protein, glycoside hydrolase family 9 protein.
  
     0.769
CHU_0709
Conserved hypothetical protein (possible metalloprotease).
  
   
 0.768
CHU_2437
Conserved hypothetical protein.
  
     0.768
CHU_3514
Conserved hypothetical protein.
  
     0.768
CHU_2611
Membrane protein, with TPR repeat.
  
    0.767
Your Current Organism:
Cytophaga hutchinsonii
NCBI taxonomy Id: 269798
Other names: C. hutchinsonii ATCC 33406, Cytophaga hutchinsonii ATCC 33406, Cytophaga hutchinsonii str. ATCC 33406, Cytophaga hutchinsonii strain ATCC 33406
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.