STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CHU_3475Conserved hypothetical protein. (225 aa)    
Predicted Functional Partners:
dsbD
Thiol:disulfide interchange protein.
     0.988
msrB
Peptide methionine sulfoxide reductase.
    
 
 0.862
msrA
Peptide methionine sulfoxide reductase; Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine.
    
 
 0.862
CHU_3585
Conserved hypothetical protein.
  
 
 0.761
CHU_1889
Thioredoxin family protein.
  
 
 0.756
CHU_3340
Conserved hypothetical protein.
  
 
 0.756
CHU_3574
Thiol-disulfide isomerase/thioredoxin.
  
 
 0.756
CHU_1165
Conserved hypothetical protein.
  
 
 0.716
CHU_2654
Hypothetical protein.
  
     0.631
CHU_2804
Hypothetical protein.
 
     0.623
Your Current Organism:
Cytophaga hutchinsonii
NCBI taxonomy Id: 269798
Other names: C. hutchinsonii ATCC 33406, Cytophaga hutchinsonii ATCC 33406, Cytophaga hutchinsonii str. ATCC 33406, Cytophaga hutchinsonii strain ATCC 33406
Server load: low (14%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.