STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CHU_3578Conserved hypothetical protein; Predicted ATP/GTP-binding protein. (308 aa)    
Predicted Functional Partners:
bglX-3
B-glucosidase, glycoside hydrolase family 3 protein; Belongs to the glycosyl hydrolase 3 family.
     
 0.774
ydjG
Oxidoreductase.
 
    0.592
exbB-2
Outer membrane transport energization protein ExbB; TC 2.C.1.1.1.
       0.456
CHU_3580
Outer membrane transport energization protein ExbD; TC 2.C.1.1.1.
       0.456
CHU_3456
Conserved hypothetical protein.
 
  
 0.449
CHU_3127
Conserved hypothetical protein; possible transport protein.
  
     0.438
CHU_1665
Conserved hypothetical protein.
  
     0.428
Your Current Organism:
Cytophaga hutchinsonii
NCBI taxonomy Id: 269798
Other names: C. hutchinsonii ATCC 33406, Cytophaga hutchinsonii ATCC 33406, Cytophaga hutchinsonii str. ATCC 33406, Cytophaga hutchinsonii strain ATCC 33406
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.