STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Gmet_0593Lipoprotein, putative. (172 aa)    
Predicted Functional Partners:
Gmet_0592
ResB-like family cytochrome c; Biogenesis protein.
       0.678
Gmet_0594
ResC/HemX-like cytochrome c; Biogenesis membrane protein.
       0.584
Gmet_0590
Hypothetical protein.
       0.529
Gmet_0591
Hypothetical protein.
       0.529
Gmet_0595
Acyl-protein synthetase.
       0.485
Gmet_0596
Hypothetical protein.
       0.485
Gmet_0589
GDP-mannose--undecaprenyl-phosphate mannosyltransferase, putative.
       0.415
Your Current Organism:
Geobacter metallireducens
NCBI taxonomy Id: 269799
Other names: G. metallireducens GS-15, Geobacter metallireducens GS-15, Geobacter metallireducens str. GS-15, Geobacter metallireducens strain GS-15
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.