STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Gmet_0706Hypothetical protein. (218 aa)    
Predicted Functional Partners:
Gmet_2984
Hypothetical protein.
  
     0.760
Gmet_0980
GTPase-activating protein, putative.
  
     0.757
Gmet_0176
Hypothetical protein.
  
     0.752
Gmet_2303
GAF domain protein.
  
     0.748
Gmet_1983
Hypothetical protein.
  
     0.741
Gmet_3436
Hypothetical protein.
  
     0.700
Gmet_2313
Regulator, PATAN and FRGAF domain-containing, putative; Domains: PATAN, FRGAF.
  
     0.697
Gmet_2555
TPR domain protein.
  
     0.695
Gmet_0102
Hypothetical protein.
  
     0.694
Gmet_0185
Hypothetical protein.
  
     0.693
Your Current Organism:
Geobacter metallireducens
NCBI taxonomy Id: 269799
Other names: G. metallireducens GS-15, Geobacter metallireducens GS-15, Geobacter metallireducens str. GS-15, Geobacter metallireducens strain GS-15
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.