STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
iorB-2Indolepyruvate:ferredoxin oxidoreductase, beta subunit. (181 aa)    
Predicted Functional Partners:
por
Pyruvate:ferredoxin/flavodoxin oxidoreductase.
  
 
 0.978
iorA-2
Indolepyruvate:ferredoxin oxidoreductase, alpha subunit; Catalyzes the ferredoxin-dependent oxidative decarboxylation of arylpyruvates.
 
 
 0.972
iorA-1
Indolepyruvate:ferredoxin oxidoreductase, alpha subunit; Catalyzes the ferredoxin-dependent oxidative decarboxylation of arylpyruvates.
 
 
 0.912
vorB
2-oxoacid:ferredoxin oxidoreductase, thiamin diphosphate-binding subunit.
 
 
 0.882
korB
2-oxoglutarate:ferredoxin oxidoreductase, thiamin diphosphate-binding subunit.
  
 
 0.822
paaK-3
Phenylacetate--coenzyme A ligase.
 
    0.792
vorA
2-oxoacid:ferredoxin oxidoreductase, alpha subunit.
 
 
 0.775
korA
2-oxoglutarate:ferredoxin oxidoreductase, alpha subunit.
 
 
 0.697
Gmet_1824
ACT domain protein.
 
    0.645
vorC
2-oxoacid:ferredoxin oxidoreductase, gamma subunit.
  
     0.637
Your Current Organism:
Geobacter metallireducens
NCBI taxonomy Id: 269799
Other names: G. metallireducens GS-15, Geobacter metallireducens GS-15, Geobacter metallireducens str. GS-15, Geobacter metallireducens strain GS-15
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.