STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Gmet_1056Hypothetical protein. (186 aa)    
Predicted Functional Partners:
Gmet_3596
Hypothetical protein.
       0.799
Gmet_1057
Sensor histidine kinase, HAMP domain-containing; Domains: HAMP, HisKA, HATPase_c.
       0.636
Gmet_1058
Sigma-54-dependent transcriptional response regulator; Domains: REC, sigma54 interaction, HTH8.
       0.636
Gmet_2499
Hypothetical protein.
  
     0.598
Gmet_2969
Hypothetical protein.
  
     0.557
Gmet_0214
Hypothetical protein.
  
     0.543
Gmet_2968
Hypothetical protein.
  
     0.515
Gmet_3092
Hypothetical protein.
  
     0.505
Gmet_1052
Hypothetical protein.
  
     0.492
Gmet_0314
Toxin, RelE family.
  
     0.472
Your Current Organism:
Geobacter metallireducens
NCBI taxonomy Id: 269799
Other names: G. metallireducens GS-15, Geobacter metallireducens GS-15, Geobacter metallireducens str. GS-15, Geobacter metallireducens strain GS-15
Server load: low (14%) [HD]