Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
Gmet_1213 | Gmet_1739 | Gmet_1213 | Gmet_1739 | NACHT domain and WD40 repeat protein. | Histone deacetylase family protein. | 0.932 |
Gmet_1213 | Gmet_1741 | Gmet_1213 | Gmet_1741 | NACHT domain and WD40 repeat protein. | Hypothetical protein. | 0.771 |
Gmet_1213 | Gmet_2658 | Gmet_1213 | Gmet_2658 | NACHT domain and WD40 repeat protein. | ankyrin/PDZ domain protein. | 0.938 |
Gmet_1213 | alaS | Gmet_1213 | Gmet_0201 | NACHT domain and WD40 repeat protein. | alanyl-tRNA synthetase; Catalyzes the attachment of alanine to tRNA(Ala) in a two- step reaction: alanine is first activated by ATP to form Ala-AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain. | 0.941 |
Gmet_1213 | rpoA | Gmet_1213 | Gmet_0653 | NACHT domain and WD40 repeat protein. | DNA-directed RNA polymerase, alpha subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.784 |
Gmet_1213 | rpoB | Gmet_1213 | Gmet_0619 | NACHT domain and WD40 repeat protein. | DNA-directed RNA polymerase, beta subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.768 |
Gmet_1213 | rpoZ | Gmet_1213 | Gmet_2326 | NACHT domain and WD40 repeat protein. | DNA-directed RNA polymerase, omega subunit; Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits. | 0.771 |
Gmet_1739 | Gmet_1213 | Gmet_1739 | Gmet_1213 | Histone deacetylase family protein. | NACHT domain and WD40 repeat protein. | 0.932 |
Gmet_1739 | Gmet_1740 | Gmet_1739 | Gmet_1740 | Histone deacetylase family protein. | Hypothetical protein. | 0.814 |
Gmet_1739 | Gmet_1741 | Gmet_1739 | Gmet_1741 | Histone deacetylase family protein. | Hypothetical protein. | 0.907 |
Gmet_1739 | Gmet_2658 | Gmet_1739 | Gmet_2658 | Histone deacetylase family protein. | ankyrin/PDZ domain protein. | 0.584 |
Gmet_1739 | htpG | Gmet_1739 | Gmet_2498 | Histone deacetylase family protein. | Heat shock protein Hsp90; Molecular chaperone. Has ATPase activity. | 0.815 |
Gmet_1740 | Gmet_1739 | Gmet_1740 | Gmet_1739 | Hypothetical protein. | Histone deacetylase family protein. | 0.814 |
Gmet_1740 | Gmet_1741 | Gmet_1740 | Gmet_1741 | Hypothetical protein. | Hypothetical protein. | 0.814 |
Gmet_1741 | Gmet_1213 | Gmet_1741 | Gmet_1213 | Hypothetical protein. | NACHT domain and WD40 repeat protein. | 0.771 |
Gmet_1741 | Gmet_1739 | Gmet_1741 | Gmet_1739 | Hypothetical protein. | Histone deacetylase family protein. | 0.907 |
Gmet_1741 | Gmet_1740 | Gmet_1741 | Gmet_1740 | Hypothetical protein. | Hypothetical protein. | 0.814 |
Gmet_1741 | Gmet_2658 | Gmet_1741 | Gmet_2658 | Hypothetical protein. | ankyrin/PDZ domain protein. | 0.771 |
Gmet_1741 | alaS | Gmet_1741 | Gmet_0201 | Hypothetical protein. | alanyl-tRNA synthetase; Catalyzes the attachment of alanine to tRNA(Ala) in a two- step reaction: alanine is first activated by ATP to form Ala-AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain. | 0.772 |
Gmet_1741 | dnaK | Gmet_1741 | Gmet_3532 | Hypothetical protein. | Chaperone protein DnaK; Acts as a chaperone; Belongs to the heat shock protein 70 family. | 0.779 |
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