Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
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experimentally determined
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gene co-occurrence
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Gmet_1908Bacterioferritin, cytochrome b1; Iron-storage protein, whose ferroxidase center binds Fe(2+) ions, oxidizes them by dioxygen to Fe(3+), and participates in the subsequent Fe(3+) oxide mineral core formation within the central cavity of the protein complex; Belongs to the bacterioferritin family. (155 aa)    
Predicted Functional Partners:
nifU
Nitrogen fixation iron-sulfur cluster assembly protein NifU; May be involved in the formation or repair of [Fe-S] clusters present in iron-sulfur proteins.
  
 
 0.921
hemH
Ferrochelatase; Catalyzes the ferrous insertion into protoporphyrin IX. Belongs to the ferrochelatase family.
     
 0.918
nuoBCD
NADH dehydrogenase I, B/C/D subunits; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient; In the N-terminal section; belongs to the complex I 20 kDa subunit family. In the C-terminal section; belongs to the complex I 49 [...]
   
    0.775
Gmet_1081
Hypothetical protein.
   
  
 0.711
rsbV
Anti-anti-sigma factor; Belongs to the anti-sigma-factor antagonist family.
   
  
 0.711
Gmet_2429
STAS domain protein.
   
  
 0.711
Gmet_2818
Phosphoserine phosphatase RsbU/P; Domains: REC, PAS, PAS, PP2C.
   
  
 0.592
rsbW
Anti-sigma factor, protein serine/threonine kinase.
   
  
 0.540
Gmet_1909
Pyridoxamine-5'-phosphate oxidase-related FMN-binding protein.
       0.482
Gmet_1907
Winged helix-turn-helix transcriptional regulator, Rrf2 family.
  
  
 0.469
Your Current Organism:
Geobacter metallireducens
NCBI taxonomy Id: 269799
Other names: G. metallireducens GS-15, Geobacter metallireducens GS-15, Geobacter metallireducens str. GS-15, Geobacter metallireducens strain GS-15
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