STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Gmet_22033-hydroxyacyl-CoA dehydrogenase. (290 aa)    
Predicted Functional Partners:
Gmet_2196
enoyl-CoA hydratase/isomerase.
 0.997
Gmet_2212
enoyl-CoA hydratase/isomerase.
 0.983
Gmet_1716
enoyl-CoA hydratase/isomerase; Belongs to the enoyl-CoA hydratase/isomerase family.
 0.978
Gmet_2204
enoyl-CoA hydratase/isomerase.
 0.967
Gmet_2197
Thiolase; Belongs to the thiolase-like superfamily. Thiolase family.
 0.962
Gmet_2213
Thiolase; Belongs to the thiolase-like superfamily. Thiolase family.
 0.961
Gmet_2207
enoyl-CoA hydratase/isomerase.
 
 0.959
bamN
Thiolase; Belongs to the thiolase-like superfamily. Thiolase family.
 0.955
Gmet_2268
Thiolase; Belongs to the thiolase-like superfamily. Thiolase family.
 0.954
Gmet_1719
Thiolase; Belongs to the thiolase-like superfamily. Thiolase family.
 
 0.949
Your Current Organism:
Geobacter metallireducens
NCBI taxonomy Id: 269799
Other names: G. metallireducens GS-15, Geobacter metallireducens GS-15, Geobacter metallireducens str. GS-15, Geobacter metallireducens strain GS-15
Server load: low (12%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.