STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Gmet_2332dTDP-4-dehydro-6-deoxyglucose aminotransferase; Belongs to the DegT/DnrJ/EryC1 family. (404 aa)    
Predicted Functional Partners:
Gmet_2333
Acyltransferase, left-handed parallel beta-helix (hexapeptide repeat) family.
 
  
 0.915
fdtC/fdtA
dTDP-3-amino-3,6-dideoxy-D-galactose N-acetyltransferase and dTDP-6-deoxy-D-hex-4-ulose isomerase.
  
 0.786
gnnA
UDP-N-acetylglucosamine 3-dehydrogenase, NAD-dependent.
  
 0.766
Gmet_2334
Galactosyltransferase/glucosyltransferase.
       0.759
Gmet_2331
ADP-heptose--lipopolysaccharide heptosyltransferase.
     
 0.758
Gmet_2016
Aminotransferase, AHBA_syn family; Belongs to the DegT/DnrJ/EryC1 family.
  
     0.720
Gmet_3178
Mannose-1-phosphate guanylyltransferase and mannose-6-phosphate isomerase-related protein.
  
  
 0.699
Gmet_0454
Glycosyltransferase, SpsF domain-containing.
  
  
 0.686
pseB
UDP-N-acetylglucosamine 4,6-dehydratase and UDP-2-acetamido-2,6-dideoxy-alpha-D-xylo-4-hexulose 5-epimerase.
 
  
 0.678
rmlB
dTDP-glucose 4,6-dehydratase; Belongs to the NAD(P)-dependent epimerase/dehydratase family. dTDP-glucose dehydratase subfamily.
  
  
 0.673
Your Current Organism:
Geobacter metallireducens
NCBI taxonomy Id: 269799
Other names: G. metallireducens GS-15, Geobacter metallireducens GS-15, Geobacter metallireducens str. GS-15, Geobacter metallireducens strain GS-15
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.