STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Gmet_3377ADP-ribosylglycohydrolase-related protein. (338 aa)    
Predicted Functional Partners:
glnK
Nitrogen regulatory protein P-II; Belongs to the P(II) protein family.
    
 
 0.626
glnB
Nitrogen regulatory protein P-II; Belongs to the P(II) protein family.
    
 
 0.626
Gmet_1851
Pentapeptide repeat protein.
  
     0.515
Gmet_3378
Outer membrane lipoprotein LolB, putative.
       0.496
Gmet_2758
Hypothetical protein.
  
     0.475
Gmet_3376
Hypothetical protein.
       0.463
lolE-2
Lipoprotein release ABC transporter, membrane protein.
  
     0.408
Gmet_2301
Contains 27 heme-binding sites.
  
     0.408
Gmet_1546
Hypothetical protein.
  
     0.404
Your Current Organism:
Geobacter metallireducens
NCBI taxonomy Id: 269799
Other names: G. metallireducens GS-15, Geobacter metallireducens GS-15, Geobacter metallireducens str. GS-15, Geobacter metallireducens strain GS-15
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.