Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 annotation | node2 annotation | score |
Tfu_0342 | Tfu_0343 | Putative membrane protein. | Response regulator receiver. | 0.527 |
Tfu_0342 | Tfu_0344 | Putative membrane protein. | Signal transduction histidine kinase. | 0.527 |
Tfu_0342 | Tfu_0860 | Putative membrane protein. | Hypothetical protein. | 0.490 |
Tfu_0342 | Tfu_0893 | Putative membrane protein. | Conserved hypothetical protein. | 0.402 |
Tfu_0342 | Tfu_2575 | Putative membrane protein. | Hypothetical protein. | 0.421 |
Tfu_0343 | Tfu_0342 | Response regulator receiver. | Putative membrane protein. | 0.527 |
Tfu_0343 | Tfu_0344 | Response regulator receiver. | Signal transduction histidine kinase. | 0.996 |
Tfu_0344 | Tfu_0342 | Signal transduction histidine kinase. | Putative membrane protein. | 0.527 |
Tfu_0344 | Tfu_0343 | Signal transduction histidine kinase. | Response regulator receiver. | 0.996 |
Tfu_0860 | Tfu_0342 | Hypothetical protein. | Putative membrane protein. | 0.490 |
Tfu_0860 | Tfu_2575 | Hypothetical protein. | Hypothetical protein. | 0.415 |
Tfu_0893 | Tfu_0342 | Conserved hypothetical protein. | Putative membrane protein. | 0.402 |
Tfu_2575 | Tfu_0342 | Hypothetical protein. | Putative membrane protein. | 0.421 |
Tfu_2575 | Tfu_0860 | Hypothetical protein. | Hypothetical protein. | 0.415 |