Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 annotation | node2 annotation | score |
Tfu_0250 | Tfu_0444 | PAS containing protein phosphatase 2C-like. | Conserved hypothetical protein. | 0.502 |
Tfu_0250 | Tfu_0477 | PAS containing protein phosphatase 2C-like. | ATPase. | 0.622 |
Tfu_0250 | Tfu_0478 | PAS containing protein phosphatase 2C-like. | Hypothetical protein. | 0.603 |
Tfu_0250 | Tfu_0682 | PAS containing protein phosphatase 2C-like. | Hypothetical protein. | 0.683 |
Tfu_0250 | Tfu_2140 | PAS containing protein phosphatase 2C-like. | PAS/Protein phosphatase 2C-like. | 0.732 |
Tfu_0250 | Tfu_2142 | PAS containing protein phosphatase 2C-like. | Hypothetical protein. | 0.656 |
Tfu_0250 | Tfu_2570 | PAS containing protein phosphatase 2C-like. | Forkhead-associated. | 0.516 |
Tfu_0250 | Tfu_3005 | PAS containing protein phosphatase 2C-like. | Hypothetical protein. | 0.675 |
Tfu_0442 | Tfu_0443 | Von Willebrand factor, type A. | Magnesium chelatase subunit ChlI. | 0.986 |
Tfu_0442 | Tfu_0444 | Von Willebrand factor, type A. | Conserved hypothetical protein. | 0.551 |
Tfu_0443 | Tfu_0442 | Magnesium chelatase subunit ChlI. | Von Willebrand factor, type A. | 0.986 |
Tfu_0443 | Tfu_0444 | Magnesium chelatase subunit ChlI. | Conserved hypothetical protein. | 0.575 |
Tfu_0444 | Tfu_0250 | Conserved hypothetical protein. | PAS containing protein phosphatase 2C-like. | 0.502 |
Tfu_0444 | Tfu_0442 | Conserved hypothetical protein. | Von Willebrand factor, type A. | 0.551 |
Tfu_0444 | Tfu_0443 | Conserved hypothetical protein. | Magnesium chelatase subunit ChlI. | 0.575 |
Tfu_0444 | Tfu_0477 | Conserved hypothetical protein. | ATPase. | 0.653 |
Tfu_0444 | Tfu_0478 | Conserved hypothetical protein. | Hypothetical protein. | 0.489 |
Tfu_0444 | Tfu_0682 | Conserved hypothetical protein. | Hypothetical protein. | 0.597 |
Tfu_0444 | Tfu_2140 | Conserved hypothetical protein. | PAS/Protein phosphatase 2C-like. | 0.523 |
Tfu_0444 | Tfu_2142 | Conserved hypothetical protein. | Hypothetical protein. | 0.553 |
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