STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Tfu_0588ATPase. (512 aa)    
Predicted Functional Partners:
Tfu_0589
ABC-type cobalt transport system.
 
 0.998
Tfu_0587
ABC transporter, permease protein.
 
  
 0.966
Tfu_0913
Oligopeptide/dipeptide ABC transporter, ATP-binding protein; Belongs to the ABC transporter superfamily.
 
  
0.636
Tfu_2312
Putative cobalt transport system permease protein.
  
 
 0.617
Tfu_1632
Putative ABC transporter permease.
 
  
 0.478
Tfu_0911
ABC-type dipeptide/oligopeptide/nickel transport systems, permease components.
 
  
 0.469
Tfu_0912
ABC-type dipeptide/oligopeptide/nickel transport systems, permease components.
  
 0.464
Tfu_0817
ABC peptide/nickel transport system permease protein.
 
  
 0.463
Tfu_0591
Conserved hypothetical protein.
       0.431
Tfu_0590
Short chain enoyl-CoA hydratase; Belongs to the enoyl-CoA hydratase/isomerase family.
       0.418
Your Current Organism:
Thermobifida fusca
NCBI taxonomy Id: 269800
Other names: T. fusca YX, Thermobifida fusca YX, Thermobifida fusca str. YX, Thermobifida fusca strain YX
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.