Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
Tfu_0639 | Tfu_0640 | Tfu_0639 | Tfu_0640 | Putative secreted protein. | Putative membrane protein. | 0.906 |
Tfu_0640 | Tfu_0639 | Tfu_0640 | Tfu_0639 | Putative membrane protein. | Putative secreted protein. | 0.906 |
Tfu_0640 | Tfu_1535 | Tfu_0640 | Tfu_1535 | Putative membrane protein. | Ankyrin. | 0.725 |
Tfu_0640 | Tfu_1792 | Tfu_0640 | Tfu_1792 | Putative membrane protein. | Calcium-binding EF-hand. | 0.586 |
Tfu_0640 | Tfu_1831 | Tfu_0640 | Tfu_1831 | Putative membrane protein. | Putative heat shock protein, hsp90-family. | 0.784 |
Tfu_0640 | Tfu_1924 | Tfu_0640 | Tfu_1924 | Putative membrane protein. | Conserved hypothetical protein. | 0.640 |
Tfu_0640 | Tfu_2079 | Tfu_0640 | Tfu_2079 | Putative membrane protein. | Hypothetical protein. | 0.809 |
Tfu_0640 | Tfu_2164 | Tfu_0640 | Tfu_2164 | Putative membrane protein. | Hypothetical protein. | 0.639 |
Tfu_0640 | Tfu_2820 | Tfu_0640 | Tfu_2820 | Putative membrane protein. | Peptidylprolyl isomerase; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides; Belongs to the cyclophilin-type PPIase family. | 0.521 |
Tfu_0640 | Tfu_3069 | Tfu_0640 | Tfu_3069 | Putative membrane protein. | Peptidylprolyl isomerase; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides; Belongs to the cyclophilin-type PPIase family. | 0.521 |
Tfu_0640 | nuoN | Tfu_0640 | Tfu_2682 | Putative membrane protein. | Proton-translocating NADH-quinone oxidoreductase, chain N; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be a menaquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient; Belongs to the complex I subunit 2 family. | 0.550 |
Tfu_1535 | Tfu_0640 | Tfu_1535 | Tfu_0640 | Ankyrin. | Putative membrane protein. | 0.725 |
Tfu_1535 | Tfu_1792 | Tfu_1535 | Tfu_1792 | Ankyrin. | Calcium-binding EF-hand. | 0.894 |
Tfu_1535 | Tfu_1831 | Tfu_1535 | Tfu_1831 | Ankyrin. | Putative heat shock protein, hsp90-family. | 0.447 |
Tfu_1535 | Tfu_1924 | Tfu_1535 | Tfu_1924 | Ankyrin. | Conserved hypothetical protein. | 0.494 |
Tfu_1535 | Tfu_2079 | Tfu_1535 | Tfu_2079 | Ankyrin. | Hypothetical protein. | 0.937 |
Tfu_1535 | Tfu_2164 | Tfu_1535 | Tfu_2164 | Ankyrin. | Hypothetical protein. | 0.715 |
Tfu_1535 | Tfu_2820 | Tfu_1535 | Tfu_2820 | Ankyrin. | Peptidylprolyl isomerase; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides; Belongs to the cyclophilin-type PPIase family. | 0.401 |
Tfu_1535 | Tfu_3069 | Tfu_1535 | Tfu_3069 | Ankyrin. | Peptidylprolyl isomerase; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides; Belongs to the cyclophilin-type PPIase family. | 0.401 |
Tfu_1535 | nuoN | Tfu_1535 | Tfu_2682 | Ankyrin. | Proton-translocating NADH-quinone oxidoreductase, chain N; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be a menaquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient; Belongs to the complex I subunit 2 family. | 0.558 |
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