Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
Tfu_0043 | Tfu_0492 | Tfu_0043 | Tfu_0492 | Aspartate kinase; Belongs to the aspartokinase family. | Aminotransferase. | 0.626 |
Tfu_0043 | Tfu_1715 | Tfu_0043 | Tfu_1715 | Aspartate kinase; Belongs to the aspartokinase family. | Dihydrodipicolinate synthase. | 0.704 |
Tfu_0043 | Tfu_2424 | Tfu_0043 | Tfu_2424 | Aspartate kinase; Belongs to the aspartokinase family. | Homoserine dehydrogenase. | 0.988 |
Tfu_0043 | asd | Tfu_0043 | Tfu_0042 | Aspartate kinase; Belongs to the aspartokinase family. | Aspartate semialdehyde dehydrogenase; Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L-aspartyl- 4-phosphate; Belongs to the aspartate-semialdehyde dehydrogenase family. | 0.999 |
Tfu_0043 | dapA | Tfu_0043 | Tfu_0791 | Aspartate kinase; Belongs to the aspartokinase family. | Dihydrodipicolinate synthase; Catalyzes the condensation of (S)-aspartate-beta-semialdehyde [(S)-ASA] and pyruvate to 4-hydroxy-tetrahydrodipicolinate (HTPA). | 0.774 |
Tfu_0043 | dapB | Tfu_0043 | Tfu_0786 | Aspartate kinase; Belongs to the aspartokinase family. | Dihydrodipicolinate reductase; Catalyzes the conversion of 4-hydroxy-tetrahydrodipicolinate (HTPA) to tetrahydrodipicolinate. | 0.899 |
Tfu_0043 | dapF | Tfu_0043 | Tfu_0816 | Aspartate kinase; Belongs to the aspartokinase family. | Diaminopimelate epimerase; Catalyzes the stereoinversion of LL-2,6-diaminoheptanedioate (L,L-DAP) to meso-diaminoheptanedioate (meso-DAP), a precursor of L- lysine and an essential component of the bacterial peptidoglycan. | 0.821 |
Tfu_0043 | lysA | Tfu_0043 | Tfu_2425 | Aspartate kinase; Belongs to the aspartokinase family. | Diaminopimelate decarboxylase; Specifically catalyzes the decarboxylation of meso- diaminopimelate (meso-DAP) to L-lysine. | 0.985 |
Tfu_0492 | Tfu_0043 | Tfu_0492 | Tfu_0043 | Aminotransferase. | Aspartate kinase; Belongs to the aspartokinase family. | 0.626 |
Tfu_0492 | Tfu_1715 | Tfu_0492 | Tfu_1715 | Aminotransferase. | Dihydrodipicolinate synthase. | 0.459 |
Tfu_0492 | Tfu_2424 | Tfu_0492 | Tfu_2424 | Aminotransferase. | Homoserine dehydrogenase. | 0.474 |
Tfu_0492 | asd | Tfu_0492 | Tfu_0042 | Aminotransferase. | Aspartate semialdehyde dehydrogenase; Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L-aspartyl- 4-phosphate; Belongs to the aspartate-semialdehyde dehydrogenase family. | 0.566 |
Tfu_0492 | dapA | Tfu_0492 | Tfu_0791 | Aminotransferase. | Dihydrodipicolinate synthase; Catalyzes the condensation of (S)-aspartate-beta-semialdehyde [(S)-ASA] and pyruvate to 4-hydroxy-tetrahydrodipicolinate (HTPA). | 0.552 |
Tfu_0492 | dapB | Tfu_0492 | Tfu_0786 | Aminotransferase. | Dihydrodipicolinate reductase; Catalyzes the conversion of 4-hydroxy-tetrahydrodipicolinate (HTPA) to tetrahydrodipicolinate. | 0.733 |
Tfu_0492 | dapF | Tfu_0492 | Tfu_0816 | Aminotransferase. | Diaminopimelate epimerase; Catalyzes the stereoinversion of LL-2,6-diaminoheptanedioate (L,L-DAP) to meso-diaminoheptanedioate (meso-DAP), a precursor of L- lysine and an essential component of the bacterial peptidoglycan. | 0.872 |
Tfu_0492 | lysA | Tfu_0492 | Tfu_2425 | Aminotransferase. | Diaminopimelate decarboxylase; Specifically catalyzes the decarboxylation of meso- diaminopimelate (meso-DAP) to L-lysine. | 0.771 |
Tfu_0793 | dapA | Tfu_0793 | Tfu_0791 | ATPase; Belongs to the FtsK/SpoIIIE/SftA family. | Dihydrodipicolinate synthase; Catalyzes the condensation of (S)-aspartate-beta-semialdehyde [(S)-ASA] and pyruvate to 4-hydroxy-tetrahydrodipicolinate (HTPA). | 0.594 |
Tfu_0793 | rnj | Tfu_0793 | Tfu_0792 | ATPase; Belongs to the FtsK/SpoIIIE/SftA family. | Putative hydrolase of the metallo-beta-lactamase superfamily; An RNase that has 5'-3' exonuclease and possibly endonuclease activity. Involved in maturation of rRNA and in some organisms also mRNA maturation and/or decay. | 0.886 |
Tfu_1715 | Tfu_0043 | Tfu_1715 | Tfu_0043 | Dihydrodipicolinate synthase. | Aspartate kinase; Belongs to the aspartokinase family. | 0.704 |
Tfu_1715 | Tfu_0492 | Tfu_1715 | Tfu_0492 | Dihydrodipicolinate synthase. | Aminotransferase. | 0.459 |
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