STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Tfu_0913Oligopeptide/dipeptide ABC transporter, ATP-binding protein; Belongs to the ABC transporter superfamily. (316 aa)    
Predicted Functional Partners:
Tfu_0912
ABC-type dipeptide/oligopeptide/nickel transport systems, permease components.
  
 0.998
Tfu_1631
ABC transporter, permease protein.
  
 0.991
Tfu_1822
Oligopeptide transport integral membrane protein.
  
 0.991
Tfu_2292
Putative peptide ABC transporter permease protein.
  
 0.990
Tfu_0911
ABC-type dipeptide/oligopeptide/nickel transport systems, permease components.
 
 0.983
Tfu_0914
ABC-type oligopeptide transport system ATPase component; Belongs to the ABC transporter superfamily.
 
  
0.942
Tfu_0910
ABC-type dipeptide/oligopeptide/nickel transport systems, periplasmic components.
  
 0.927
Tfu_1632
Putative ABC transporter permease.
 
 0.924
Tfu_1820
Putative peptide transport system permease protein.
 
 0.922
Tfu_1308
ABC-type spermidine/putrescine transport systems ATPase components; Belongs to the ABC transporter superfamily.
 
    
0.908
Your Current Organism:
Thermobifida fusca
NCBI taxonomy Id: 269800
Other names: T. fusca YX, Thermobifida fusca YX, Thermobifida fusca str. YX, Thermobifida fusca strain YX
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.