STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Tfu_1158ABC-type multidrug transport system ATPase and permease components. (614 aa)    
Predicted Functional Partners:
pstB
Phosphate transport system permease protein 1; Part of the ABC transporter complex PstSACB involved in phosphate import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Phosphate importer (TC 3.A.1.7) family.
 
     
0.900
potA
Spermidine/putrescine ABC transporter ATP-binding subunit; Part of the ABC transporter complex PotABCD involved in spermidine/putrescine import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Spermidine/putrescine importer (TC 3.A.1.11.1) family.
 
 
   
0.898
Tfu_1157
ABC-type multidrug transport system ATPase and permease components.
 
    
0.833
Tfu_1505
ABC-type nitrate/sulfonate/bicarbonate transport system ATPase component.
     
0.619
Tfu_1847
ABC-type antimicrobial peptide transport system ATPase component.
    
0.614
Tfu_2144
ATPase.
   
 0.563
Tfu_1819
ATPase components of various ABC-type transport systems contain duplicated ATPase; Belongs to the ABC transporter superfamily.
     
0.535
dnaK
Heat shock protein Hsp70; Acts as a chaperone; Belongs to the heat shock protein 70 family.
 
 0.530
Tfu_2164
Hypothetical protein.
  
 
 0.429
Tfu_0418
3'-Phosphoadenosine 5'-phosphosulfate (PAPS) 3'-phosphatase.
 
 
   0.421
Your Current Organism:
Thermobifida fusca
NCBI taxonomy Id: 269800
Other names: T. fusca YX, Thermobifida fusca YX, Thermobifida fusca str. YX, Thermobifida fusca strain YX
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.