STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Tfu_1237Conserved hypothetical protein. (157 aa)    
Predicted Functional Partners:
Tfu_1235
Conserved hypothetical protein.
  
    0.774
Tfu_1236
Putative reductase.
       0.773
fbiA
LPPG:FO 2-phospho-L-lactate transferase; Catalyzes the transfer of the phosphoenolpyruvate moiety from enoylpyruvoyl-2-diphospho-5'-guanosine (EPPG) to 7,8-didemethyl-8- hydroxy-5-deazariboflavin (FO) with the formation of dehydro coenzyme F420-0 and GMP.
 
   
 0.589
Tfu_2558
Putative membrane protein.
 
 
 
 0.564
Tfu_1234
Putative hydrolase.
  
    0.541
Tfu_2518
Coenzyme F420-0 gamma-glutamyl ligase.
  
  
 0.494
Tfu_1530
Similar to Acetyl/propionyl-CoA carboxylase alpha subunit.
 
    0.488
Tfu_2519
FO synthase subunit 1 / FO synthase subunit 2.
     
 0.480
Tfu_0972
Conserved hypothetical protein.
  
     0.462
Tfu_0137
Conserved hypothetical protein.
  
     0.454
Your Current Organism:
Thermobifida fusca
NCBI taxonomy Id: 269800
Other names: T. fusca YX, Thermobifida fusca YX, Thermobifida fusca str. YX, Thermobifida fusca strain YX
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.