STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Tfu_1278Thiolase; Belongs to the thiolase-like superfamily. Thiolase family. (397 aa)    
Predicted Functional Partners:
Tfu_1904
Short chain enoyl-CoA hydratase / 3-hydroxyacyl-CoA dehydrogenase.
 
 0.980
Tfu_1282
Putative acyl-CoA dehydrogenase.
  
 0.973
Tfu_1284
Putative acyl-CoA dehydrogenase.
  
 0.971
Tfu_1999
acyl-CoA dehydrogenase.
 
 0.967
Tfu_2485
acyl-CoA dehydrogenase.
  
 0.967
Tfu_1068
glutaryl-CoA dehydrogenase.
  
 0.934
Tfu_2239
Conserved hypothetical protein.
  
 0.934
Tfu_2555
propionyl-CoA carboxylase complex B subunit.
  
 0.929
Tfu_0947
Putative acetyl/propionyl CoA carboxylase alpha subunit: biotin carboxylase.
  
 0.923
Tfu_1228
Putative acyl-CoA carboxylase complex A subunit.
  
 0.923
Your Current Organism:
Thermobifida fusca
NCBI taxonomy Id: 269800
Other names: T. fusca YX, Thermobifida fusca YX, Thermobifida fusca str. YX, Thermobifida fusca strain YX
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.