Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 annotation | node2 annotation | score |
Tfu_1281 | Tfu_1282 | butyryl-CoA dehydrogenase. | Putative acyl-CoA dehydrogenase. | 0.606 |
Tfu_1281 | Tfu_1283 | butyryl-CoA dehydrogenase. | Probable short-chain type dehydrogenase/reductase. | 0.418 |
Tfu_1281 | Tfu_1284 | butyryl-CoA dehydrogenase. | Putative acyl-CoA dehydrogenase. | 0.440 |
Tfu_1281 | Tfu_1286 | butyryl-CoA dehydrogenase. | Possible dehydratase, MaoC family. | 0.460 |
Tfu_1282 | Tfu_1281 | Putative acyl-CoA dehydrogenase. | butyryl-CoA dehydrogenase. | 0.606 |
Tfu_1282 | Tfu_1283 | Putative acyl-CoA dehydrogenase. | Probable short-chain type dehydrogenase/reductase. | 0.579 |
Tfu_1282 | Tfu_1284 | Putative acyl-CoA dehydrogenase. | Putative acyl-CoA dehydrogenase. | 0.559 |
Tfu_1282 | Tfu_1285 | Putative acyl-CoA dehydrogenase. | citryl-CoA lyase; Belongs to the HpcH/HpaI aldolase family. | 0.536 |
Tfu_1282 | Tfu_1286 | Putative acyl-CoA dehydrogenase. | Possible dehydratase, MaoC family. | 0.554 |
Tfu_1282 | Tfu_1287 | Putative acyl-CoA dehydrogenase. | Betaine-aldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family. | 0.458 |
Tfu_1282 | Tfu_1288 | Putative acyl-CoA dehydrogenase. | Conserved hypothetical protein; Belongs to the CoA-transferase III family. | 0.470 |
Tfu_1282 | Tfu_1289 | Putative acyl-CoA dehydrogenase. | Transcriptional regulator, GntR family. | 0.411 |
Tfu_1283 | Tfu_1281 | Probable short-chain type dehydrogenase/reductase. | butyryl-CoA dehydrogenase. | 0.418 |
Tfu_1283 | Tfu_1282 | Probable short-chain type dehydrogenase/reductase. | Putative acyl-CoA dehydrogenase. | 0.579 |
Tfu_1283 | Tfu_1284 | Probable short-chain type dehydrogenase/reductase. | Putative acyl-CoA dehydrogenase. | 0.627 |
Tfu_1283 | Tfu_1285 | Probable short-chain type dehydrogenase/reductase. | citryl-CoA lyase; Belongs to the HpcH/HpaI aldolase family. | 0.570 |
Tfu_1283 | Tfu_1286 | Probable short-chain type dehydrogenase/reductase. | Possible dehydratase, MaoC family. | 0.633 |
Tfu_1283 | Tfu_1287 | Probable short-chain type dehydrogenase/reductase. | Betaine-aldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family. | 0.631 |
Tfu_1283 | Tfu_1288 | Probable short-chain type dehydrogenase/reductase. | Conserved hypothetical protein; Belongs to the CoA-transferase III family. | 0.503 |
Tfu_1284 | Tfu_1281 | Putative acyl-CoA dehydrogenase. | butyryl-CoA dehydrogenase. | 0.440 |
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