Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 annotation | node2 annotation | score |
Tfu_0277 | Tfu_1426 | Surface protein from Gram-positive cocci, anchor region. | Hypothetical protein. | 0.635 |
Tfu_0277 | Tfu_2268 | Surface protein from Gram-positive cocci, anchor region. | Hypothetical protein. | 0.464 |
Tfu_0698 | Tfu_1084 | Hypothetical protein. | Serine/threonine protein kinase. | 0.729 |
Tfu_0698 | Tfu_1198 | Hypothetical protein. | Hypothetical protein. | 0.754 |
Tfu_0698 | Tfu_1420 | Hypothetical protein. | Hypothetical protein. | 0.741 |
Tfu_0698 | Tfu_1426 | Hypothetical protein. | Hypothetical protein. | 0.724 |
Tfu_0698 | Tfu_1857 | Hypothetical protein. | Hypothetical protein. | 0.554 |
Tfu_0698 | Tfu_2107 | Hypothetical protein. | Hypothetical protein. | 0.463 |
Tfu_0698 | Tfu_2669 | Hypothetical protein. | Conserved hypothetical protein. | 0.663 |
Tfu_0698 | Tfu_2670 | Hypothetical protein. | Conserved hypothetical protein. | 0.617 |
Tfu_1084 | Tfu_0698 | Serine/threonine protein kinase. | Hypothetical protein. | 0.729 |
Tfu_1084 | Tfu_1198 | Serine/threonine protein kinase. | Hypothetical protein. | 0.704 |
Tfu_1084 | Tfu_1420 | Serine/threonine protein kinase. | Hypothetical protein. | 0.678 |
Tfu_1084 | Tfu_1426 | Serine/threonine protein kinase. | Hypothetical protein. | 0.705 |
Tfu_1084 | Tfu_1857 | Serine/threonine protein kinase. | Hypothetical protein. | 0.509 |
Tfu_1084 | Tfu_2107 | Serine/threonine protein kinase. | Hypothetical protein. | 0.595 |
Tfu_1084 | Tfu_2268 | Serine/threonine protein kinase. | Hypothetical protein. | 0.529 |
Tfu_1084 | Tfu_2669 | Serine/threonine protein kinase. | Conserved hypothetical protein. | 0.631 |
Tfu_1084 | Tfu_2670 | Serine/threonine protein kinase. | Conserved hypothetical protein. | 0.487 |
Tfu_1198 | Tfu_0698 | Hypothetical protein. | Hypothetical protein. | 0.754 |
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