STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Tfu_1500Alkanesulfonate monooxygenase. (388 aa)    
Predicted Functional Partners:
Tfu_1499
Conserved hypothetical protein.
 
 0.993
Tfu_1328
Conserved hypothetical protein.
 
 0.970
Tfu_2472
Similar to flavoprotein.
 
 0.952
Tfu_1931
Conserved hypothetical protein.
 
 0.944
Tfu_1502
Alkanesulfonate monooxygenase.
 
  
 
0.926
Tfu_1888
Putative nitrite/sulphite reductase; Belongs to the nitrite and sulfite reductase 4Fe-4S domain family.
     
 0.906
cysH
Phosphoadenylylsulfate reductase (thioredoxin); Reduction of activated sulfate into sulfite. Belongs to the PAPS reductase family. CysH subfamily.
   
 
  0.901
Tfu_0354
3-mercaptopyruvate sulfurtransferase.
     
  0.900
Tfu_2719
Thiosulfate sulfurtransferase.
     
  0.900
Tfu_1497
Alkanesulfonate monooxygenase.
 
  
 
0.841
Your Current Organism:
Thermobifida fusca
NCBI taxonomy Id: 269800
Other names: T. fusca YX, Thermobifida fusca YX, Thermobifida fusca str. YX, Thermobifida fusca strain YX
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.