STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Tfu_1658Tyrosine protein kinase:Serine/threonine protein kinase:Sel1-like repeat. (599 aa)    
Predicted Functional Partners:
Tfu_3062
Protein phosphatase 2C-like.
 
 0.833
Tfu_0297
Protein phosphatase 2C-like.
 
 
 0.830
Tfu_0601
Serine/threonine protein kinase.
 
     0.772
Tfu_1084
Serine/threonine protein kinase.
 
     0.656
Tfu_2144
ATPase.
  
 0.614
Tfu_3060
FHA domain protein.
 
 
 0.584
Tfu_0286
GAF sensor hybrid histidine kinase.
  
 
 0.577
Tfu_1395
Forkhead-associated.
 
 
 0.491
Tfu_0056
Tyrosine protein kinase:WD-40 repeat:Serine/threonine protein kinase.
 
 
0.490
Tfu_1659
Hypothetical protein.
  
    0.490
Your Current Organism:
Thermobifida fusca
NCBI taxonomy Id: 269800
Other names: T. fusca YX, Thermobifida fusca YX, Thermobifida fusca str. YX, Thermobifida fusca strain YX
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.