STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Tfu_2078Hypothetical protein. (968 aa)    
Predicted Functional Partners:
Tfu_2079
Hypothetical protein.
       0.799
Tfu_2077
Hypothetical protein.
       0.777
Tfu_2076
Hypothetical protein.
       0.776
Tfu_2080
Hypothetical protein.
       0.773
Tfu_0793
ATPase; Belongs to the FtsK/SpoIIIE/SftA family.
   
 
 0.559
Tfu_0451
Conserved hypothetical protein.
    
 
 0.523
Tfu_2990
Cellulose-binding, family II, bacterial type.
   
   0.463
Tfu_1654
Hypothetical protein.
  
   0.436
Tfu_2712
Cellulase. Glycosyl Hydrolase family 5.
    
 
 0.415
Your Current Organism:
Thermobifida fusca
NCBI taxonomy Id: 269800
Other names: T. fusca YX, Thermobifida fusca YX, Thermobifida fusca str. YX, Thermobifida fusca strain YX
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.