STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Tfu_2083PAS/Protein phosphatase 2C-like. (672 aa)    
Predicted Functional Partners:
Tfu_0286
GAF sensor hybrid histidine kinase.
  
 
 0.999
Tfu_0122
Anti-sigma factor antagonist; Belongs to the anti-sigma-factor antagonist family.
 
 
 0.874
Tfu_0610
Diguanylate cyclase/phosphodiesterase.
  
 
 0.864
Tfu_3055
Anti-sigma factor antagonist; Belongs to the anti-sigma-factor antagonist family.
 
 
 0.859
Tfu_2343
Multi-sensor signal transduction histidine kinase.
 
  
 0.857
Tfu_0287
Protein phosphatase 2C-like, withe GAF domain.
 
 
0.801
Tfu_2764
Anti-sigma factor antagonist; Belongs to the anti-sigma-factor antagonist family.
 
 
 0.800
Tfu_2082
Phosphoesterase, PA-phosphatase related.
  
    0.778
Tfu_2200
Protein phosphatase 2C-like.
 
    0.756
Tfu_1739
PAS/Protein phosphatase 2C-like.
 
 
0.754
Your Current Organism:
Thermobifida fusca
NCBI taxonomy Id: 269800
Other names: T. fusca YX, Thermobifida fusca YX, Thermobifida fusca str. YX, Thermobifida fusca strain YX
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.