STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Tfu_2113Conserved hypothetical protein. (143 aa)    
Predicted Functional Partners:
Tfu_2047
Putative ATP/GTP-binding protein.
 
 
 0.907
Tfu_2447
Putative ATP/GTP-binding protein.
 
 
 0.907
Tfu_0760
Putative ATP/GTP-binding protein.
 
 
 0.905
Tfu_0943
Putative ATP/GTP-binding protein.
 
 
 0.905
Tfu_1430
Putative ATP/GTP-binding protein.
 
 
 0.904
Tfu_2804
Putative ATP/GTP-binding protein.
 
 
 0.900
Tfu_0942
Conserved hypothetical protein.
 
  
 0.783
Tfu_1431
Conserved hypothetical protein.
 
  
 0.783
Tfu_2048
Conserved hypothetical protein.
 
  
 0.783
Tfu_2050
ATP-binding region, ATPase-like.
   
 0.783
Your Current Organism:
Thermobifida fusca
NCBI taxonomy Id: 269800
Other names: T. fusca YX, Thermobifida fusca YX, Thermobifida fusca str. YX, Thermobifida fusca strain YX
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.