node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
Tfu_2219 | Tfu_2220 | Tfu_2219 | Tfu_2220 | Similar to GTPases. | Putative ABC transporter. | 0.822 |
Tfu_2219 | rplC | Tfu_2219 | Tfu_2646 | Similar to GTPases. | LSU ribosomal protein L3P; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit; Belongs to the universal ribosomal protein uL3 family. | 0.690 |
Tfu_2219 | rplD | Tfu_2219 | Tfu_2645 | Similar to GTPases. | LSU ribosomal protein L4P; One of the primary rRNA binding proteins, this protein initially binds near the 5'-end of the 23S rRNA. It is important during the early stages of 50S assembly. It makes multiple contacts with different domains of the 23S rRNA in the assembled 50S subunit and ribosome. | 0.686 |
Tfu_2219 | rplI | Tfu_2219 | Tfu_3092 | Similar to GTPases. | LSU ribosomal protein L9P; Binds to the 23S rRNA. | 0.685 |
Tfu_2219 | rplK | Tfu_2219 | Tfu_2658 | Similar to GTPases. | LSU ribosomal protein L11P; Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors. | 0.695 |
Tfu_2219 | rplM | Tfu_2219 | Tfu_2614 | Similar to GTPases. | LSU ribosomal protein L13P; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly. | 0.683 |
Tfu_2219 | rplS | Tfu_2219 | Tfu_0666 | Similar to GTPases. | LSU ribosomal protein L19P; This protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site. | 0.673 |
Tfu_2219 | rplV | Tfu_2219 | Tfu_2641 | Similar to GTPases. | LSU ribosomal protein L22P; This protein binds specifically to 23S rRNA; its binding is stimulated by other ribosomal proteins, e.g. L4, L17, and L20. It is important during the early stages of 50S assembly. It makes multiple contacts with different domains of the 23S rRNA in the assembled 50S subunit and ribosome (By similarity). | 0.677 |
Tfu_2219 | rpmB | Tfu_2219 | Tfu_0645 | Similar to GTPases. | LSU ribosomal protein L28P; Belongs to the bacterial ribosomal protein bL28 family. | 0.674 |
Tfu_2219 | rpmF | Tfu_2219 | Tfu_0650 | Similar to GTPases. | LSU ribosomal protein L32P; Belongs to the bacterial ribosomal protein bL32 family. | 0.686 |
Tfu_2220 | Tfu_2219 | Tfu_2220 | Tfu_2219 | Putative ABC transporter. | Similar to GTPases. | 0.822 |
rplC | Tfu_2219 | Tfu_2646 | Tfu_2219 | LSU ribosomal protein L3P; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit; Belongs to the universal ribosomal protein uL3 family. | Similar to GTPases. | 0.690 |
rplC | rplD | Tfu_2646 | Tfu_2645 | LSU ribosomal protein L3P; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit; Belongs to the universal ribosomal protein uL3 family. | LSU ribosomal protein L4P; One of the primary rRNA binding proteins, this protein initially binds near the 5'-end of the 23S rRNA. It is important during the early stages of 50S assembly. It makes multiple contacts with different domains of the 23S rRNA in the assembled 50S subunit and ribosome. | 0.999 |
rplC | rplI | Tfu_2646 | Tfu_3092 | LSU ribosomal protein L3P; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit; Belongs to the universal ribosomal protein uL3 family. | LSU ribosomal protein L9P; Binds to the 23S rRNA. | 0.999 |
rplC | rplK | Tfu_2646 | Tfu_2658 | LSU ribosomal protein L3P; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit; Belongs to the universal ribosomal protein uL3 family. | LSU ribosomal protein L11P; Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors. | 0.998 |
rplC | rplM | Tfu_2646 | Tfu_2614 | LSU ribosomal protein L3P; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit; Belongs to the universal ribosomal protein uL3 family. | LSU ribosomal protein L13P; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly. | 0.999 |
rplC | rplS | Tfu_2646 | Tfu_0666 | LSU ribosomal protein L3P; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit; Belongs to the universal ribosomal protein uL3 family. | LSU ribosomal protein L19P; This protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site. | 0.999 |
rplC | rplV | Tfu_2646 | Tfu_2641 | LSU ribosomal protein L3P; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit; Belongs to the universal ribosomal protein uL3 family. | LSU ribosomal protein L22P; This protein binds specifically to 23S rRNA; its binding is stimulated by other ribosomal proteins, e.g. L4, L17, and L20. It is important during the early stages of 50S assembly. It makes multiple contacts with different domains of the 23S rRNA in the assembled 50S subunit and ribosome (By similarity). | 0.999 |
rplC | rpmB | Tfu_2646 | Tfu_0645 | LSU ribosomal protein L3P; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit; Belongs to the universal ribosomal protein uL3 family. | LSU ribosomal protein L28P; Belongs to the bacterial ribosomal protein bL28 family. | 0.998 |
rplC | rpmF | Tfu_2646 | Tfu_0650 | LSU ribosomal protein L3P; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit; Belongs to the universal ribosomal protein uL3 family. | LSU ribosomal protein L32P; Belongs to the bacterial ribosomal protein bL32 family. | 0.970 |