Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 annotation | node2 annotation | score |
Tfu_2276 | Tfu_2277 | Putative integral membrane protein. | ATP-binding region, ATPase-like. | 0.773 |
Tfu_2276 | Tfu_2278 | Putative integral membrane protein. | Regulatory protein, LuxR:Response regulator receiver. | 0.700 |
Tfu_2276 | Tfu_2279 | Putative integral membrane protein. | Hypothetical protein. | 0.448 |
Tfu_2276 | Tfu_2280 | Putative integral membrane protein. | Hypothetical protein. | 0.430 |
Tfu_2276 | Tfu_2281 | Putative integral membrane protein. | Similar to Outer membrane protein and related peptidoglycan-associated (lipo)proteins. | 0.461 |
Tfu_2277 | Tfu_2276 | ATP-binding region, ATPase-like. | Putative integral membrane protein. | 0.773 |
Tfu_2277 | Tfu_2278 | ATP-binding region, ATPase-like. | Regulatory protein, LuxR:Response regulator receiver. | 0.950 |
Tfu_2277 | Tfu_2279 | ATP-binding region, ATPase-like. | Hypothetical protein. | 0.448 |
Tfu_2277 | Tfu_2280 | ATP-binding region, ATPase-like. | Hypothetical protein. | 0.430 |
Tfu_2277 | Tfu_2281 | ATP-binding region, ATPase-like. | Similar to Outer membrane protein and related peptidoglycan-associated (lipo)proteins. | 0.417 |
Tfu_2278 | Tfu_2276 | Regulatory protein, LuxR:Response regulator receiver. | Putative integral membrane protein. | 0.700 |
Tfu_2278 | Tfu_2277 | Regulatory protein, LuxR:Response regulator receiver. | ATP-binding region, ATPase-like. | 0.950 |
Tfu_2278 | Tfu_2279 | Regulatory protein, LuxR:Response regulator receiver. | Hypothetical protein. | 0.493 |
Tfu_2278 | Tfu_2280 | Regulatory protein, LuxR:Response regulator receiver. | Hypothetical protein. | 0.472 |
Tfu_2279 | Tfu_2276 | Hypothetical protein. | Putative integral membrane protein. | 0.448 |
Tfu_2279 | Tfu_2277 | Hypothetical protein. | ATP-binding region, ATPase-like. | 0.448 |
Tfu_2279 | Tfu_2278 | Hypothetical protein. | Regulatory protein, LuxR:Response regulator receiver. | 0.493 |
Tfu_2279 | Tfu_2280 | Hypothetical protein. | Hypothetical protein. | 0.737 |
Tfu_2279 | Tfu_2281 | Hypothetical protein. | Similar to Outer membrane protein and related peptidoglycan-associated (lipo)proteins. | 0.471 |
Tfu_2280 | Tfu_2276 | Hypothetical protein. | Putative integral membrane protein. | 0.430 |
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