rpmE protein (Thermobifida fusca) - STRING interaction network

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second shell of interactors

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Score

rpmE

LSU ribosomal protein L31P; Binds the 23S rRNA. (69 aa)

Predicted Functional Partners:

rpmB

0.999

rpsP

0.999

rplS

0.999

rpsO

0.999

rpmJ

0.999

rplR

0.999

rpmG

0.999

rpsF

0.999

rpsT

0.998

rpsD

0.998

Your Current Organism:

Thermobifida fusca

NCBI taxonomy Id: 269800
Other names: T. fusca YX, Thermobifida fusca YX, Thermobifida fusca str. YX, Thermobifida fusca strain YX

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
rplR	rplS	Tfu_2630	Tfu_0666	LSU ribosomal protein L18P; This is one of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance.	LSU ribosomal protein L19P; This protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site.	0.999
rplR	rpmB	Tfu_2630	Tfu_0645	LSU ribosomal protein L18P; This is one of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance.	LSU ribosomal protein L28P; Belongs to the bacterial ribosomal protein bL28 family.	0.999
rplR	rpmE	Tfu_2630	Tfu_2420	LSU ribosomal protein L18P; This is one of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance.	LSU ribosomal protein L31P; Binds the 23S rRNA.	0.999
rplR	rpmG	Tfu_2630	Tfu_2667	LSU ribosomal protein L18P; This is one of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance.	LSU ribosomal protein L33P; Belongs to the bacterial ribosomal protein bL33 family.	0.999
rplR	rpmJ	Tfu_2630	Tfu_2621	LSU ribosomal protein L18P; This is one of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance.	LSU ribosomal protein L36P; Belongs to the bacterial ribosomal protein bL36 family.	0.999
rplR	rpsD	Tfu_2630	Tfu_1013	LSU ribosomal protein L18P; This is one of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance.	SSU ribosomal protein S4P; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit.	0.999
rplR	rpsF	Tfu_2630	Tfu_3095	LSU ribosomal protein L18P; This is one of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance.	SSU ribosomal protein S6P; Binds together with S18 to 16S ribosomal RNA.	0.999
rplR	rpsO	Tfu_2630	Tfu_0783	LSU ribosomal protein L18P; This is one of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance.	SSU ribosomal protein S15P; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it helps nucleate assembly of the platform of the 30S subunit by binding and bridging several RNA helices of the 16S rRNA.	0.999
rplR	rpsP	Tfu_2630	Tfu_0662	LSU ribosomal protein L18P; This is one of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance.	SSU ribosomal protein S16P; Belongs to the bacterial ribosomal protein bS16 family.	0.998
rplR	rpsT	Tfu_2630	Tfu_0827	LSU ribosomal protein L18P; This is one of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance.	SSU ribosomal protein S20P; Binds directly to 16S ribosomal RNA.	0.994
rplS	rplR	Tfu_0666	Tfu_2630	LSU ribosomal protein L19P; This protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site.	LSU ribosomal protein L18P; This is one of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance.	0.999
rplS	rpmB	Tfu_0666	Tfu_0645	LSU ribosomal protein L19P; This protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site.	LSU ribosomal protein L28P; Belongs to the bacterial ribosomal protein bL28 family.	0.999
rplS	rpmE	Tfu_0666	Tfu_2420	LSU ribosomal protein L19P; This protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site.	LSU ribosomal protein L31P; Binds the 23S rRNA.	0.999
rplS	rpmG	Tfu_0666	Tfu_2667	LSU ribosomal protein L19P; This protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site.	LSU ribosomal protein L33P; Belongs to the bacterial ribosomal protein bL33 family.	0.998
rplS	rpmJ	Tfu_0666	Tfu_2621	LSU ribosomal protein L19P; This protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site.	LSU ribosomal protein L36P; Belongs to the bacterial ribosomal protein bL36 family.	0.998
rplS	rpsD	Tfu_0666	Tfu_1013	LSU ribosomal protein L19P; This protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site.	SSU ribosomal protein S4P; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit.	0.999
rplS	rpsF	Tfu_0666	Tfu_3095	LSU ribosomal protein L19P; This protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site.	SSU ribosomal protein S6P; Binds together with S18 to 16S ribosomal RNA.	0.999
rplS	rpsO	Tfu_0666	Tfu_0783	LSU ribosomal protein L19P; This protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site.	SSU ribosomal protein S15P; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it helps nucleate assembly of the platform of the 30S subunit by binding and bridging several RNA helices of the 16S rRNA.	0.999
rplS	rpsP	Tfu_0666	Tfu_0662	LSU ribosomal protein L19P; This protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site.	SSU ribosomal protein S16P; Belongs to the bacterial ribosomal protein bS16 family.	0.999
rplS	rpsT	Tfu_0666	Tfu_0827	LSU ribosomal protein L19P; This protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site.	SSU ribosomal protein S20P; Binds directly to 16S ribosomal RNA.	0.997