STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Tfu_2766Hypothetical protein. (187 aa)    
Predicted Functional Partners:
Tfu_0951
Putative metal-binding protein.
   
 0.976
Tfu_2704
Conserved hypothetical protein.
   
 0.779
Tfu_0957
Superoxide dismutase; Destroys radicals which are normally produced within the cells and which are toxic to biological systems. Belongs to the iron/manganese superoxide dismutase family.
   
 
 0.762
Tfu_1019
Ubiquinol-cytochrome c reductase, cytochrome b subunit.
    
 
 0.718
Tfu_1172
Similar to methyltransferases.
  
     0.678
Tfu_2085
Protease inhibitor precursor; Belongs to the protease inhibitor I16 (SSI) family.
  
     0.678
Tfu_3079
Conserved hypothetical protein.
    
   0.649
Tfu_2335
Probable monooxygenase.
  
     0.644
Tfu_0972
Conserved hypothetical protein.
  
     0.641
Tfu_1905
Putative regulatory protein.
  
     0.636
Your Current Organism:
Thermobifida fusca
NCBI taxonomy Id: 269800
Other names: T. fusca YX, Thermobifida fusca YX, Thermobifida fusca str. YX, Thermobifida fusca strain YX
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.