STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Tfu_2874Hypothetical protein. (251 aa)    
Predicted Functional Partners:
Tfu_2511
Conserved hypothetical protein.
   
    0.682
Tfu_2875
HhH-GPD:Iron-sulfur cluster loop.
       0.659
Tfu_2532
Putative transferase.
  
     0.554
Tfu_1017
Possible conserved integral membrane protein; Part of cytochrome c oxidase, its function is unknown. Belongs to the cytochrome c oxidase bacterial subunit CtaF family.
  
     0.531
Tfu_0771
Conserved hypothetical protein.
  
     0.523
Tfu_0522
Conserved hypothetical protein.
  
     0.485
Tfu_2917
Integral membrane protein.
  
     0.483
Tfu_1947
Conserved hypothetical protein.
  
    0.471
Tfu_0165
Hypothetical protein.
  
     0.458
Tfu_2110
Hypothetical protein.
  
     0.443
Your Current Organism:
Thermobifida fusca
NCBI taxonomy Id: 269800
Other names: T. fusca YX, Thermobifida fusca YX, Thermobifida fusca str. YX, Thermobifida fusca strain YX
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.