Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
Tfu_0225 | Tfu_0584 | Tfu_0225 | Tfu_0584 | Alpha,alpha-trehalose-phosphate synthase (UDP-forming). | Trehalose synthase. Glycosyl Hydrolase family 13. | 0.740 |
Tfu_0225 | Tfu_3044 | Tfu_0225 | Tfu_3044 | Alpha,alpha-trehalose-phosphate synthase (UDP-forming). | Trehalose 6-phosphate phosphorylase. | 0.527 |
Tfu_0225 | glgE | Tfu_0225 | Tfu_0585 | Alpha,alpha-trehalose-phosphate synthase (UDP-forming). | Alpha amylase, catalytic subdomain; Maltosyltransferase that uses maltose 1-phosphate (M1P) as the sugar donor to elongate linear or branched alpha-(1->4)-glucans. Is involved in a branched alpha-glucan biosynthetic pathway from trehalose, together with TreS, Mak and GlgB. | 0.739 |
Tfu_0584 | Tfu_0225 | Tfu_0584 | Tfu_0225 | Trehalose synthase. Glycosyl Hydrolase family 13. | Alpha,alpha-trehalose-phosphate synthase (UDP-forming). | 0.740 |
Tfu_0584 | Tfu_0830 | Tfu_0584 | Tfu_0830 | Trehalose synthase. Glycosyl Hydrolase family 13. | Multiple sugar transport system permease protein. | 0.455 |
Tfu_0584 | Tfu_0832 | Tfu_0584 | Tfu_0832 | Trehalose synthase. Glycosyl Hydrolase family 13. | Multiple sugar transport system substrate-binding protein. | 0.506 |
Tfu_0584 | Tfu_3044 | Tfu_0584 | Tfu_3044 | Trehalose synthase. Glycosyl Hydrolase family 13. | Trehalose 6-phosphate phosphorylase. | 0.466 |
Tfu_0584 | glgE | Tfu_0584 | Tfu_0585 | Trehalose synthase. Glycosyl Hydrolase family 13. | Alpha amylase, catalytic subdomain; Maltosyltransferase that uses maltose 1-phosphate (M1P) as the sugar donor to elongate linear or branched alpha-(1->4)-glucans. Is involved in a branched alpha-glucan biosynthetic pathway from trehalose, together with TreS, Mak and GlgB. | 0.977 |
Tfu_0753 | Tfu_0830 | Tfu_0753 | Tfu_0830 | Putative ABC transporter periplasmic substrate-binding protein. | Multiple sugar transport system permease protein. | 0.933 |
Tfu_0753 | Tfu_3044 | Tfu_0753 | Tfu_3044 | Putative ABC transporter periplasmic substrate-binding protein. | Trehalose 6-phosphate phosphorylase. | 0.438 |
Tfu_0830 | Tfu_0584 | Tfu_0830 | Tfu_0584 | Multiple sugar transport system permease protein. | Trehalose synthase. Glycosyl Hydrolase family 13. | 0.455 |
Tfu_0830 | Tfu_0753 | Tfu_0830 | Tfu_0753 | Multiple sugar transport system permease protein. | Putative ABC transporter periplasmic substrate-binding protein. | 0.933 |
Tfu_0830 | Tfu_0832 | Tfu_0830 | Tfu_0832 | Multiple sugar transport system permease protein. | Multiple sugar transport system substrate-binding protein. | 0.999 |
Tfu_0830 | Tfu_3044 | Tfu_0830 | Tfu_3044 | Multiple sugar transport system permease protein. | Trehalose 6-phosphate phosphorylase. | 0.452 |
Tfu_0832 | Tfu_0584 | Tfu_0832 | Tfu_0584 | Multiple sugar transport system substrate-binding protein. | Trehalose synthase. Glycosyl Hydrolase family 13. | 0.506 |
Tfu_0832 | Tfu_0830 | Tfu_0832 | Tfu_0830 | Multiple sugar transport system substrate-binding protein. | Multiple sugar transport system permease protein. | 0.999 |
Tfu_0832 | Tfu_3044 | Tfu_0832 | Tfu_3044 | Multiple sugar transport system substrate-binding protein. | Trehalose 6-phosphate phosphorylase. | 0.438 |
Tfu_3042 | Tfu_3043 | Tfu_3042 | Tfu_3043 | CBS. | HAD-superfamily hydrolase subfamily IA, variant 3:Beta-phosphoglucomutase hydrolase. | 0.493 |
Tfu_3042 | Tfu_3044 | Tfu_3042 | Tfu_3044 | CBS. | Trehalose 6-phosphate phosphorylase. | 0.503 |
Tfu_3043 | Tfu_3042 | Tfu_3043 | Tfu_3042 | HAD-superfamily hydrolase subfamily IA, variant 3:Beta-phosphoglucomutase hydrolase. | CBS. | 0.493 |
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