STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KXA17621.1Anchored repeat-type ABC transporter, permease subunit; KEGG: apb:SAR116_2225 1.3e-30 zinc ABC transporter membrane spanning protein K09816; Psort location: CytoplasmicMembrane, score: 10.00. (293 aa)    
Predicted Functional Partners:
KXA17622.1
Anchored repeat-type ABC transporter, ATP-binding subunit; KEGG: rdn:HMPREF0733_10998 3.4e-57 ABC transporter ATP-binding protein; Psort location: CytoplasmicMembrane, score: 9.96.
 0.997
KXA15402.1
Putative manganese transport system ATP-binding protein MntA; KEGG: gvg:HMPREF0421_20687 1.3e-119 ABC transporter ATP-binding protein; Psort location: CytoplasmicMembrane, score: 9.51.
 0.985
KXA15401.1
ABC transporter, substrate-binding protein; KEGG: apb:SAR116_2227 1.4e-06 periplasmic solute binding protein K09815; Psort location: CytoplasmicMembrane, score: 9.68.
 
 0.977
KXA17623.1
Anchored repeat ABC transporter, substrate-binding protein; KEGG: apb:SAR116_2227 6.3e-15 periplasmic solute binding protein K09815; Psort location: CytoplasmicMembrane, score: 9.81.
 
 0.971
KXA17625.1
Actinobacterial surface-anchored protein.
 
 
 0.968
KXA15948.1
KEGG: gvg:HMPREF0421_20105 5.3e-194 ABC transporter ATP-binding protein K10243; Psort location: CytoplasmicMembrane, score: 9.96.
    
 0.924
KXA16667.1
ABC transporter, substrate-binding protein, family 5; KEGG: kra:Krad_1125 6.5e-118 4-phytase K02035; Psort location: Cellwall, score: 9.21.
  
 
 0.922
KXA15720.1
KEGG: pva:Pvag_0007 1.2e-27 ABC transporter permease; Psort location: CytoplasmicMembrane, score: 10.00.
  
 
 0.919
KXA15311.1
ABC transporter, permease protein; KEGG: apb:SAR116_1445 1.1e-19 polar amino acid uptake family ABC transporter permease K02029; Psort location: CytoplasmicMembrane, score: 10.00.
  
 
 0.919
KXA15312.1
ABC transporter, permease protein; KEGG: llm:llmg_1942 9.3e-25 glnP; glutamine ABC transporter permease and substrate binding protein K02029:K02030; Psort location: CytoplasmicMembrane, score: 10.00.
  
 
 0.919
Your Current Organism:
Gardnerella vaginalis
NCBI taxonomy Id: 2702
Other names: ATCC 14018, CCUG 3717, CIP 70.74, Corynebacterium vaginale, DSM 4944, G. vaginalis, Haemophilus hemolyticus vaginalis, Haemophilus vaginalis, JCM 11026, LMG 7832, LMG:7832, NCTC 10287, NCTC 10915, strain 594
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