STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KXA17627.1KEGG: gvh:HMPREF9231_1252 1.2e-95 isochorismatase family protein. (184 aa)    
Predicted Functional Partners:
KXA15536.1
NAD+ synthase; KEGG: gvg:HMPREF0421_20632 3.3e-297 nadE; NH(3)-dependent NAD+ synthetase K01950; Psort location: Cytoplasmic, score: 7.50.
  
 
 0.903
KXA15682.1
KEGG: gvh:HMPREF9231_0240 0. adh; aldehyde-alcohol dehydrogenase 2 K04072; Psort location: Cytoplasmic, score: 9.97.
  
  
 0.719
KXA17057.1
KEGG: gvh:HMPREF9231_0973 3.1e-276 GMP synthase; K01951 GMP synthase (glutamine-hydrolysing); Psort location: Cytoplasmic, score: 7.50.
     
 0.681
KXA16424.1
HTH domain protein; KEGG: ova:OBV_10270 6.3e-56 pscK; pseudouridine kinase; Psort location: Cytoplasmic, score: 9.97.
  
  
 0.635
KXA15161.1
KEGG: gvh:HMPREF9231_0694 0. phosphoribosylformylglycinamidine synthase K01952; Psort location: Cytoplasmic, score: 9.97.
       0.610
KXA16302.1
KEGG: gvh:HMPREF9231_1244 1.2e-164 gpsA; glycerol-3-phosphate dehydrogenase [NAD(P)+] K00057; Psort location: Cytoplasmic, score: 7.50.
  
 
 0.595
KXA17628.1
Hypothetical protein.
       0.584
KXA15305.1
KEGG: ccm:Ccan_01720 2.5e-45 protein mrp-like protein K03593.
  
  
 0.572
KXA17626.1
Actinobacterial surface-anchored protein; KEGG: ddi:DDB_G0281179 4.2e-08 clkA; CLK family protein kinase; K08287 dual-specificity kinase.
  
    0.563
KXA16385.1
KEGG: gvh:HMPREF9231_0401 1.1e-243 pncB; nicotinate phosphoribosyltransferase K00763.
  
  
 0.556
Your Current Organism:
Gardnerella vaginalis
NCBI taxonomy Id: 2702
Other names: ATCC 14018, CCUG 3717, CIP 70.74, Corynebacterium vaginale, DSM 4944, G. vaginalis, Haemophilus hemolyticus vaginalis, Haemophilus vaginalis, JCM 11026, LMG 7832, LMG:7832, NCTC 10287, NCTC 10915, strain 594
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