STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KXA17608.1Putative mutacin ABC transporter, ATP-binding protein MutF; KEGG: bya:BANAU_3847 5.2e-61 mrsF; ATP-binding protein MrsF K09687; Psort location: CytoplasmicMembrane, score: 8.78. (254 aa)    
Predicted Functional Partners:
KXA17611.1
Hypothetical protein; Psort location: CytoplasmicMembrane, score: 10.00.
 
  
 0.936
KXA17607.1
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein; KEGG: mcu:HMPREF0573_10444 6.9e-185 sensor histidine kinase; Psort location: CytoplasmicMembrane, score: 9.68.
 
 
 0.921
KXA15719.1
KEGG: bde:BDP_0469 4.1e-100 amino acid transport ATP-binding protein; Psort location: CytoplasmicMembrane, score: 9.99.
   
 
0.920
KXA15878.1
KEGG: gvg:HMPREF0421_20178 0. ABC transporter ATP-binding protein K02031:K02034; Psort location: CytoplasmicMembrane, score: 10.00.
   
0.889
KXA17609.1
DNA-binding response regulator MtrA family protein; KEGG: npu:Npun_F5788 9.9e-35 two component transcriptional regulator K11329; Psort location: Cytoplasmic, score: 9.97.
 
   
 0.873
KXA17610.1
Hypothetical protein; Psort location: CytoplasmicMembrane, score: 10.00.
  
  
 0.828
KXA17246.1
KEGG: bde:BDP_0641 2.4e-127 ftsE; cell division ATP-binding protein ftsE K09812; Psort location: CytoplasmicMembrane, score: 9.96.
    
0.813
KXA15338.1
KEGG: bde:BDP_1338 1.5e-166 ABC transporter ATP-binding protein K02006; Psort location: CytoplasmicMembrane, score: 10.00.
    
0.764
KXA17141.1
KEGG: bya:BANAU_3421 3.3e-82 Lipid A export ATP-binding/permease protein msbA; Psort location: CytoplasmicMembrane, score: 10.00.
 
0.659
AtpD
ATP synthase F1, beta subunit; KEGG: gvg:HMPREF0421_20003 1.5e-260 atpD; ATP synthase F1 sector subunit beta K02112; Psort location: CytoplasmicMembrane, score: 8.78.
   
 0.629
Your Current Organism:
Gardnerella vaginalis
NCBI taxonomy Id: 2702
Other names: ATCC 14018, CCUG 3717, CIP 70.74, Corynebacterium vaginale, DSM 4944, G. vaginalis, Haemophilus hemolyticus vaginalis, Haemophilus vaginalis, JCM 11026, LMG 7832, LMG:7832, NCTC 10287, NCTC 10915, strain 594
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