STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KXA17563.1DNA-binding helix-turn-helix protein; KEGG: mla:Mlab_1603 2.2e-05 adenine deaminase K01486; Psort location: CytoplasmicMembrane, score: 9.55. (214 aa)    
Predicted Functional Partners:
KXA16045.1
Repeat protein; KEGG: cfl:Cfla_2912 4.3e-15 1,4-beta cellobiohydrolase; K01179 endoglucanase; Psort location: Cellwall, score: 10.00.
 
 
 0.811
KXA16701.1
GA module; KEGG: dwi:Dwil_GK22102 2.6e-27 GK22102 gene product from transcript GK22102-RA; K00907 myosin-light-chain kinase; Psort location: Cellwall, score: 9.39.
 
  
 0.800
KXA17586.1
Repeat protein; KEGG: bbp:BBPR_0025 2.3e-15 alpha-L-arabinofuranosidase; Psort location: Cellwall, score: 9.26.
 
  
 0.790
KXA16290.1
M protein repeat protein; KEGG: lif:LINJ_16_1550 1.5e-41 putative kinesin; Psort location: Cellwall, score: 9.39.
 
  
 0.787
KXA16439.1
LPXTG-motif protein cell wall anchor domain protein; KEGG: isc:IscW_ISCW000348 1.1e-38 secreted mucin MUC17, putative; Psort location: Cellwall, score: 9.39.
 
  
 0.704
KXA17264.1
Hypothetical protein; KEGG: hel:HELO_1989 3.0e-16 rne; ribonuclease E K08300; Psort location: Cellwall, score: 9.20.
  
     0.662
KXA17607.1
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein; KEGG: mcu:HMPREF0573_10444 6.9e-185 sensor histidine kinase; Psort location: CytoplasmicMembrane, score: 9.68.
 
   
 0.527
KXA17193.1
LytTr DNA-binding domain protein.
 
  
 0.525
KXA15154.1
RecA protein; KEGG: jde:Jden_1041 1.7e-135 recA protein K03553; Psort location: Cytoplasmic, score: 9.97.
  
  
 0.504
KXA15304.1
DNA ligase; KEGG: gvg:HMPREF0421_20836 0. ligA; NAD-dependent DNA ligase LigA K01972; Psort location: Cytoplasmic, score: 7.50.
 
 
 
 0.495
Your Current Organism:
Gardnerella vaginalis
NCBI taxonomy Id: 2702
Other names: ATCC 14018, CCUG 3717, CIP 70.74, Corynebacterium vaginale, DSM 4944, G. vaginalis, Haemophilus hemolyticus vaginalis, Haemophilus vaginalis, JCM 11026, LMG 7832, LMG:7832, NCTC 10287, NCTC 10915, strain 594
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.