STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KXA17568.1Hypothetical protein; Psort location: CytoplasmicMembrane, score: 10.00. (245 aa)    
Predicted Functional Partners:
KXA15878.1
KEGG: gvg:HMPREF0421_20178 0. ABC transporter ATP-binding protein K02031:K02034; Psort location: CytoplasmicMembrane, score: 10.00.
  
 
 0.995
KXA15338.1
KEGG: bde:BDP_1338 1.5e-166 ABC transporter ATP-binding protein K02006; Psort location: CytoplasmicMembrane, score: 10.00.
  
 
 0.950
KXA17567.1
ABC-2 type transporter; Psort location: CytoplasmicMembrane, score: 10.00.
    
  0.912
KXA17569.1
KEGG: rdn:HMPREF0733_11515 5.3e-52 ABC transporter ATP-binding protein K09687; Psort location: CytoplasmicMembrane, score: 8.78.
  
 
 0.844
KXA17139.1
YhgE/Pip domain protein; KEGG: pkn:PKH_142780 3.5e-08 dihydropteroate synthase; K00796 dihydropteroate synthase K00950; Psort location: CytoplasmicMembrane, score: 10.00.
  
 
  0.802
KXA15615.1
ABC transporter, ATP-binding protein; KEGG: bbp:BBPR_0362 9.2e-158 ABC transporter permease K02049; Psort location: CytoplasmicMembrane, score: 9.96.
    
 0.725
KXA15948.1
KEGG: gvg:HMPREF0421_20105 5.3e-194 ABC transporter ATP-binding protein K10243; Psort location: CytoplasmicMembrane, score: 9.96.
    
 0.722
KXA15830.1
KEGG: bde:BDP_0387 4.3e-128 pstS; phosphate-binding protein K02040.
    
 0.722
KXA17040.1
Hypothetical protein.
  
 
 0.688
KXA16667.1
ABC transporter, substrate-binding protein, family 5; KEGG: kra:Krad_1125 6.5e-118 4-phytase K02035; Psort location: Cellwall, score: 9.21.
    
 0.681
Your Current Organism:
Gardnerella vaginalis
NCBI taxonomy Id: 2702
Other names: ATCC 14018, CCUG 3717, CIP 70.74, Corynebacterium vaginale, DSM 4944, G. vaginalis, Haemophilus hemolyticus vaginalis, Haemophilus vaginalis, JCM 11026, LMG 7832, LMG:7832, NCTC 10287, NCTC 10915, strain 594
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