STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KXA17455.1Putative oligopeptide transport system permease protein OppC; KEGG: bra:BRADO1095 1.8e-35 oppC; peptide ABC transporter membrane protein K02034; Psort location: CytoplasmicMembrane, score: 10.00. (315 aa)    
Predicted Functional Partners:
KXA17456.1
Putative phosphonate C-P lyase system protein PhnK; KEGG: gvh:HMPREF9231_1269 0. gsiA; glutathione ABC transporter, ATP-binding protein GsiA; Psort location: CytoplasmicMembrane, score: 9.96.
 
 0.994
KXA17454.1
ABC transporter, permease protein; KEGG: bra:BRADO1094 8.2e-31 appB; oligopeptide transport system permease K02033; Psort location: CytoplasmicMembrane, score: 10.00.
 
 0.964
KXA15877.1
KEGG: gvg:HMPREF0421_20179 2.4e-143 ABC transporter ATP-binding protein K02032; Psort location: CytoplasmicMembrane, score: 9.96.
 
 0.964
KXA17005.1
Putative phosphonate C-P lyase system protein PhnK; KEGG: axy:AXYL_05630 5.8e-101 ABC transporter K02031:K02032; Psort location: CytoplasmicMembrane, score: 9.99.
 
 0.955
KXA15210.1
KEGG: gvg:HMPREF0421_20914 9.4e-268 ABC transporter ATP-binding protein; Psort location: CytoplasmicMembrane, score: 8.78.
 
 0.950
KXA17457.1
ABC transporter, substrate-binding protein, family 5; KEGG: dhd:Dhaf_0453 6.1e-18 4-phytase K02035; Psort location: Cellwall, score: 9.21.
 
 0.939
KXA16664.1
Putative phosphonate C-P lyase system protein PhnK; KEGG: bde:BDP_1489 3.3e-288 oppD2; peptide ABC transporter ATP-binding protein K02031:K02032; Psort location: CytoplasmicMembrane, score: 8.78.
 
 0.939
KXA17007.1
ABC transporter, permease protein; KEGG: tle:Tlet_0072 1.3e-50 nickel-transporting ATPase K02033; Psort location: CytoplasmicMembrane, score: 10.00.
 
 0.900
KXA15212.1
ABC transporter, permease protein; KEGG: tle:Tlet_0072 7.1e-41 nickel-transporting ATPase K02033; Psort location: CytoplasmicMembrane, score: 10.00.
 
 0.859
KXA15534.1
KEGG: gvg:HMPREF0421_20629 2.6e-121 ABC transporter ATP-binding protein K02071; Psort location: CytoplasmicMembrane, score: 8.78.
 
 
 0.840
Your Current Organism:
Gardnerella vaginalis
NCBI taxonomy Id: 2702
Other names: ATCC 14018, CCUG 3717, CIP 70.74, Corynebacterium vaginale, DSM 4944, G. vaginalis, Haemophilus hemolyticus vaginalis, Haemophilus vaginalis, JCM 11026, LMG 7832, LMG:7832, NCTC 10287, NCTC 10915, strain 594
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