STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KXA17460.1KEGG: bde:BDP_2113 2.5e-228 ABC transporter ATP-binding protein/permease K06147; Psort location: CytoplasmicMembrane, score: 10.00. (598 aa)    
Predicted Functional Partners:
KXA17459.1
KEGG: gvg:HMPREF0421_20290 1.4e-234 ABC transporter ATP-binding protein K06147; Psort location: CytoplasmicMembrane, score: 10.00.
 
    
0.939
KXA17417.1
KEGG: gvg:HMPREF0421_20925 2.2e-133 ABC transporter ATP-binding protein; Psort location: CytoplasmicMembrane, score: 9.96.
   
0.913
KXA15719.1
KEGG: bde:BDP_0469 4.1e-100 amino acid transport ATP-binding protein; Psort location: CytoplasmicMembrane, score: 9.99.
   
0.913
PstB
KEGG: gvh:HMPREF9231_1200 1.4e-136 pstB; phosphate ABC transporter ATP-binding protein K02036; Psort location: CytoplasmicMembrane, score: 9.96.
   
 
0.906
KXA15948.1
KEGG: gvg:HMPREF0421_20105 5.3e-194 ABC transporter ATP-binding protein K10243; Psort location: CytoplasmicMembrane, score: 9.96.
 
 
0.885
KXA15436.1
KEGG: gvg:HMPREF0421_20715 1.2e-77 ABC transporter ATP-binding protein K15555; Psort location: CytoplasmicMembrane, score: 8.78.
 
0.803
KXA15877.1
KEGG: gvg:HMPREF0421_20179 2.4e-143 ABC transporter ATP-binding protein K02032; Psort location: CytoplasmicMembrane, score: 9.96.
   
0.786
KXA15192.1
KEGG: bde:BDP_1889 2.5e-68 vexP2; ABC transporter ATP-binding protein K02003; Psort location: CytoplasmicMembrane, score: 9.99.
   
0.746
KXA17456.1
Putative phosphonate C-P lyase system protein PhnK; KEGG: gvh:HMPREF9231_1269 0. gsiA; glutathione ABC transporter, ATP-binding protein GsiA; Psort location: CytoplasmicMembrane, score: 9.96.
   
0.682
KXA17569.1
KEGG: rdn:HMPREF0733_11515 5.3e-52 ABC transporter ATP-binding protein K09687; Psort location: CytoplasmicMembrane, score: 8.78.
 
0.648
Your Current Organism:
Gardnerella vaginalis
NCBI taxonomy Id: 2702
Other names: ATCC 14018, CCUG 3717, CIP 70.74, Corynebacterium vaginale, DSM 4944, G. vaginalis, Haemophilus hemolyticus vaginalis, Haemophilus vaginalis, JCM 11026, LMG 7832, LMG:7832, NCTC 10287, NCTC 10915, strain 594
Server load: low (30%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.