STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KXA17467.1Transporter, gluconate:H+ symporter family; KEGG: ebe:B21_04152 4.1e-68 gntP; GntP Gluconate Gnt transporter K03299; Psort location: CytoplasmicMembrane, score: 10.00. (446 aa)    
Predicted Functional Partners:
KXA17468.1
KEGG: gvg:HMPREF0421_20299 2.0e-153 gnd; 6-phosphogluconate dehydrogenase K00033; Psort location: Cytoplasmic, score: 7.50.
  
  
 0.901
KXA17466.1
Shikimate kinase; KEGG: gvh:HMPREF9231_1260 1.1e-88 putative gluconokinase; K00851 gluconokinase; Psort location: CytoplasmicMembrane, score: 8.16.
  
  
 0.879
KXA17465.1
FCD domain protein; KEGG: pfe:PSF113_3206 4.4e-05 GntR family transcriptional regulator; Psort location: Cytoplasmic, score: 7.50.
 
   
 0.835
KXA15414.1
Oxidoreductase, short chain dehydrogenase/reductase family protein; KEGG: gvg:HMPREF0421_20694 3.3e-137 fabG; 3-oxoacyl-ACP reductase K00059; Psort location: Cytoplasmic, score: 9.97.
  
  
 0.545
Gnd
KEGG: gvg:HMPREF0421_21329 2.7e-254 gnd2; phosphogluconate dehydrogenase K00033; Psort location: Cytoplasmic, score: 7.50.
  
  
 0.526
KXA15873.1
Transcriptional regulator, GntR family; KEGG: ecf:ECH74115_0120 7.9e-08 pdhR; transcriptional regulator PdhR K05799; Psort location: Cytoplasmic, score: 7.50.
     
 0.505
KXA16370.1
KEGG: gvg:HMPREF0421_21107 5.1e-196 atoB; acetyl-CoA acetyltransferase K00626; Psort location: Cytoplasmic, score: 9.97.
  
  
 0.465
KXA15682.1
KEGG: gvh:HMPREF9231_0240 0. adh; aldehyde-alcohol dehydrogenase 2 K04072; Psort location: Cytoplasmic, score: 9.97.
  
  
 0.461
KXA16424.1
HTH domain protein; KEGG: ova:OBV_10270 6.3e-56 pscK; pseudouridine kinase; Psort location: Cytoplasmic, score: 9.97.
  
  
 0.404
Your Current Organism:
Gardnerella vaginalis
NCBI taxonomy Id: 2702
Other names: ATCC 14018, CCUG 3717, CIP 70.74, Corynebacterium vaginale, DSM 4944, G. vaginalis, Haemophilus hemolyticus vaginalis, Haemophilus vaginalis, JCM 11026, LMG 7832, LMG:7832, NCTC 10287, NCTC 10915, strain 594
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