STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KXA17468.1KEGG: gvg:HMPREF0421_20299 2.0e-153 gnd; 6-phosphogluconate dehydrogenase K00033; Psort location: Cytoplasmic, score: 7.50. (291 aa)    
Predicted Functional Partners:
KXA17466.1
Shikimate kinase; KEGG: gvh:HMPREF9231_1260 1.1e-88 putative gluconokinase; K00851 gluconokinase; Psort location: CytoplasmicMembrane, score: 8.16.
    
 0.981
KXA16067.1
KEGG: gvg:HMPREF0421_21326 4.2e-272 zwf; glucose-6-phosphate dehydrogenase K00036; Psort location: CytoplasmicMembrane, score: 8.16.
  
 0.980
KXA17467.1
Transporter, gluconate:H+ symporter family; KEGG: ebe:B21_04152 4.1e-68 gntP; GntP Gluconate Gnt transporter K03299; Psort location: CytoplasmicMembrane, score: 10.00.
  
  
 0.901
KXA16065.1
6-phosphogluconolactonase; KEGG: gvg:HMPREF0421_21328 1.1e-138 pgl; putative 6-phosphogluconolactonase K01057.
 
  
 0.814
KXA15924.1
Hypothetical protein.
     
 0.768
Tal
Transaldolase; KEGG: gvg:HMPREF0421_20790 4.6e-188 tal; transaldolase K00616; Psort location: Cytoplasmic, score: 7.50.
  
  
 0.746
KXA15925.1
DNA replication and repair protein RecF; KEGG: pen:PSEEN0003 0.00079 recF; recombination protein F K03629; Psort location: Cytoplasmic, score: 7.50.
     
 0.722
Pgi
KEGG: gvh:HMPREF9231_0314 0. glucose-6-phosphate isomerase K01810; Psort location: Cytoplasmic, score: 9.67.
     
 0.712
RpiA
KEGG: gvh:HMPREF9231_1170 1.5e-118 rpiA; ribose 5-phosphate isomerase A K01807; Psort location: Cytoplasmic, score: 7.50.
    
 0.686
Tkt
Transketolase; KEGG: gvg:HMPREF0421_20791 0. tkt; transketolase K00615; Psort location: Cytoplasmic, score: 7.50.
     
 0.671
Your Current Organism:
Gardnerella vaginalis
NCBI taxonomy Id: 2702
Other names: ATCC 14018, CCUG 3717, CIP 70.74, Corynebacterium vaginale, DSM 4944, G. vaginalis, Haemophilus hemolyticus vaginalis, Haemophilus vaginalis, JCM 11026, LMG 7832, LMG:7832, NCTC 10287, NCTC 10915, strain 594
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