STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KXA17241.1Hypothetical protein; KEGG: rle:pRL100227 4.8e-07 putative transmembrane ABC transport protein; K02028 polar amino acid transport system ATP-binding protein K02029; Psort location: CytoplasmicMembrane, score: 9.55. (75 aa)    
Predicted Functional Partners:
KXA16817.1
ABC-2 type transporter; Psort location: CytoplasmicMembrane, score: 10.00.
   
  0.937
KXA16667.1
ABC transporter, substrate-binding protein, family 5; KEGG: kra:Krad_1125 6.5e-118 4-phytase K02035; Psort location: Cellwall, score: 9.21.
  
 
 0.937
KXA15312.1
ABC transporter, permease protein; KEGG: llm:llmg_1942 9.3e-25 glnP; glutamine ABC transporter permease and substrate binding protein K02029:K02030; Psort location: CytoplasmicMembrane, score: 10.00.
    
  0.937
KXA15720.1
KEGG: pva:Pvag_0007 1.2e-27 ABC transporter permease; Psort location: CytoplasmicMembrane, score: 10.00.
    
 0.932
KXA15830.1
KEGG: bde:BDP_0387 4.3e-128 pstS; phosphate-binding protein K02040.
  
 
 0.929
KXA15214.1
ABC transporter, substrate-binding protein, family 5; KEGG: smd:Smed_3647 7.5e-37 4-phytase K02035; Psort location: Cellwall, score: 9.20.
  
 
 0.927
KXA15311.1
ABC transporter, permease protein; KEGG: apb:SAR116_1445 1.1e-19 polar amino acid uptake family ABC transporter permease K02029; Psort location: CytoplasmicMembrane, score: 10.00.
    
  0.922
KXA15880.1
ABC transporter, substrate-binding protein, family 5; KEGG: ckl:CKL_1049 1.1e-37 oppA1; OppA1 K02035; Psort location: Cellwall, score: 9.21.
  
 
 0.866
KXA15948.1
KEGG: gvg:HMPREF0421_20105 5.3e-194 ABC transporter ATP-binding protein K10243; Psort location: CytoplasmicMembrane, score: 9.96.
    
 0.855
KXA16280.1
ABC transporter, permease protein; KEGG: cpy:Cphy_1880 1.6e-107 fructose-bisphosphate aldolase K10109; Psort location: CytoplasmicMembrane, score: 10.00.
    
 0.838
Your Current Organism:
Gardnerella vaginalis
NCBI taxonomy Id: 2702
Other names: ATCC 14018, CCUG 3717, CIP 70.74, Corynebacterium vaginale, DSM 4944, G. vaginalis, Haemophilus hemolyticus vaginalis, Haemophilus vaginalis, JCM 11026, LMG 7832, LMG:7832, NCTC 10287, NCTC 10915, strain 594
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